Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Helicase, superfamily 1/2, ATP-binding domain

Term: IPR014001  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene32294 SustainPine v1.1 631
AutoFact: ATP-dependent rRNA helicase spb4 n=2 Tax=Andropogoneae RepID=B6SPG8_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead deah box 0.0
Internal
sp_v1.1_unigene35247 SustainPine v1.1 364
AutoFact: Chromodomain helicase DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RNX6_RICCO 3.0e-37
FL-Next: sp=CHD3-type chromatin-remodeling factor PICKLE; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: chromatin remodeling complex subunit 4.92229e-37
Internal
sp_v1.1_unigene36143 SustainPine v1.1 1414
AutoFact: RECQI1; RECQI1 (Arabidopsis RecQ helicase l1); ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding 0.0
FL-Next: sp=ATP-dependent DNA helicase Q-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna helicase 0.0
C-terminus
sp_v1.1_unigene36844 SustainPine v1.1 453
AutoFact: dead box ATP-dependent RNA helicase, putative 4.00001e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v1.1_unigene37192 SustainPine v1.1 777
AutoFact: DEAD-box ATP-dependent RNA helicase 37 n=2 Tax=Arabidopsis RepID=RH37_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus
sp_v1.1_unigene38455 SustainPine v1.1 463
AutoFact: SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein 0.0
FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: chromatin remodeling complex subunit 0.0
Internal
sp_v1.1_unigene38530 SustainPine v1.1 552
AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SLR6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead box atp-dependent rna 0.0
Internal
sp_v1.1_unigene38531 SustainPine v1.1 421
AutoFact: dead box ATP-dependent RNA helicase, putative; K12811 ATP-dependent RNA helicase DDX46/PRP5 [EC:3.6.4.13] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna helicase 0.0
Internal
sp_v1.1_unigene38742 SustainPine v1.1 593
AutoFact: similar to predicted protein; K10902 ATP-dependent DNA helicase Q5 [EC:3.6.1.-] 0.0
FL-Next: Isoform 2 of ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis thaliana GN=RECQL3 0.0
Blast2go: protein 0.0
Internal
sp_v1.1_unigene38763 SustainPine v1.1 741
AutoFact: DNA repair helicase rad5,16, putative (EC:2.7.11.1) 0.0
FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna repair helicase 0.0
Internal
sp_v1.1_unigene38773 SustainPine v1.1 397
AutoFact: PREDICTED: similar to RECQSIM (Arabidopsis RecQ helicase sim); ATP-dependent helicase n=1 Tax=Vitis vinifera RepID=UPI00019849D7 1.0e-38
FL-Next: sp=ATP-dependent DNA helicase Q-like SIM; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: atp-dependent dna helicase 2.67839e-38
Internal
sp_v1.1_unigene39358 SustainPine v1.1 375
AutoFact: DEAD/DEAH helicase family protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead deah box helicase family protein 0.0
Internal
sp_v1.1_unigene39665 SustainPine v1.1 631
AutoFact: DEAD-box ATP-dependent RNA helicase 1 n=3 Tax=Arabidopsis RepID=RH1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead box-like rna helicase 0.0
N-terminus
sp_v1.1_unigene39756 SustainPine v1.1 532
AutoFact: PREDICTED: similar to ATP-dependent helicase n=1 Tax=Vitis vinifera RepID=UPI00019836E3 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v1.1_unigene40224 SustainPine v1.1 309
AutoFact: U520, putative n=2 Tax=rosids RepID=B9RY79_RICCO 0.0
FL-Next: tr=U520, putative; Ricinus communis (Castor bean). 0.0
Blast2go: u5 small nuclear ribonucleoprotein helicase 1.4013e-45
Internal
sp_v1.1_unigene40840 SustainPine v1.1 480
AutoFact: OsRad54 protein n=1 Tax=Oryza sativa Japonica Group RepID=A4PBL4_ORYSJ 0.0
FL-Next: sp=ATP-dependent DNA helicase DDM1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: snf2 super family 0.0
Internal
sp_v1.1_unigene41760 SustainPine v1.1 507
AutoFact: Ribonuclease III, putative n=1 Tax=Ricinus communis RepID=B9SC13_RICCO 5.0e-31
FL-Next: Isoform 2 of Endoribonuclease Dicer homolog 4 OS=Oryza sativa subsp. japonica GN=DCL4 0.0
Blast2go: dicer-like protein 9.45558e-31
N-terminus
sp_v1.1_unigene44153 SustainPine v1.1 264
AutoFact: RECQL2; RECQL2 (ARABIDOPSIS RECQ HELICASE L2); 3'-5' DNA helicase/ ATP-dependent helicase/ four-way junction helicase/ protein binding; K10899 ATP-dependent DNA helicase Q1 [EC:3.6.1.-] 2.0e-33
FL-Next: sp=ATP-dependent DNA helicase Q-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: atp-dependent dna family expressed 3.44915e-33
Internal
sp_v1.1_unigene45179 SustainPine v1.1 330
AutoFact: DEAD/DEAH box helicase, putative; K12835 ATP-dependent RNA helicase DDX42 [EC:3.6.4.13] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v1.1_unigene50157 SustainPine v1.1 340
AutoFact: Helicase domain-containing protein n=4 Tax=Arabidopsis RepID=D7KD38_ARALY 0.0
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: helicase domain-containing protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain