Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Helicase, superfamily 1/2, ATP-binding domain

Term: IPR014001  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene20352 SustainPine v1.1 668
AutoFact: DEAD box RNA helicase, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead box atp-dependent rna 0.0
Internal
sp_v1.1_unigene20474 SustainPine v1.1 1196
AutoFact: dead box ATP-dependent RNA helicase, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead box atp-dependent rna 0.0
C-terminus
sp_v1.1_unigene20754 SustainPine v1.1 546
AutoFact: Dicer-like protein n=1 Tax=Populus trichocarpa RepID=B9GRS6_POPTR 0.0
FL-Next: sp=Endoribonuclease Dicer homolog 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dicer-like protein 0.0
Internal
sp_v1.1_unigene21724 SustainPine v1.1 830
AutoFact: dead box ATP-dependent RNA helicase, putative; K03257 translation initiation factor eIF-4A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v1.1_unigene22242 SustainPine v1.1 3918
AutoFact: helicase, putative (EC:2.7.11.1); K11654 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:3.6.1.-] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v1.1_unigene22976 SustainPine v1.1 2983
AutoFact: ISWI chromatin remodeling complex ATPase ISW1, putative (EC:2.7.11.1) 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chromatin remodeling complex subunit 0.0
Complete
sp_v1.1_unigene23011 SustainPine v1.1 1414
AutoFact: dead box ATP-dependent RNA helicase, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v1.1_unigene23770 SustainPine v1.1 2058
AutoFact: DEAD-box ATP-dependent RNA helicase 2 n=7 Tax=Poaceae RepID=RH2_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nicotiana eukaryotic translation initiation factor 4a 0.0
Complete
sp_v1.1_unigene26502 SustainPine v1.1 2163
AutoFact: gpm624; LOC100273717; K12812 ATP-dependent RNA helicase UAP56/SUB2 [EC:3.6.4.13] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene26736 SustainPine v1.1 1634
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9I6D4_POPTR 0.0
FL-Next: sp=ATP-dependent DNA helicase DDM1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: chromatin remodeling complex subunit 0.0
Putative N-terminus
sp_v1.1_unigene27466 SustainPine v1.1 566
AutoFact: DEAD/DEAH box helicase, putative n=2 Tax=Arabidopsis thaliana RepID=UPI0001A7B2D1 1.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 56 3.40714e-31
Internal
sp_v1.1_unigene27936 SustainPine v1.1 1152
AutoFact: RNA helicase n=1 Tax=Vigna radiata var. radiata RepID=Q9M6R6_PHAAU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna helicase 0.0
Internal
sp_v1.1_unigene28535 SustainPine v1.1 1934
AutoFact: ATP-dependent RNA helicase dhh1; K12614 ATP-dependent RNA helicase DDX6/DHH1 [EC:3.6.4.13] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene29612 SustainPine v1.1 3555
AutoFact: helicase, putative (EC:2.7.11.1); K11654 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:3.6.1.-] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: snf2 family dna-dependent atpase 0.0
Complete
sp_v1.1_unigene29794 SustainPine v1.1 1703
AutoFact: dead box ATP-dependent RNA helicase, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead box atp-dependent rna 0.0
Putative Complete
sp_v1.1_unigene30047 SustainPine v1.1 1285
AutoFact: PREDICTED: similar to EMB2733/ESP3 (EMBRYO DEFECTIVE 2733); ATP-dependent RNA helicase n=1 Tax=Vitis vinifera RepID=UPI00019851EB 0.0
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dead deah box helicase 0.0
Internal
sp_v1.1_unigene30624 SustainPine v1.1 401
AutoFact: Putative DEAD-box ATP-dependent RNA helicase 29 n=2 Tax=Arabidopsis RepID=RH29_ARATH 2.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 4.11101e-31
Internal
sp_v1.1_unigene31183 SustainPine v1.1 492
AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SS37_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box protein abstrakt 0.0
Internal
sp_v1.1_unigene31298 SustainPine v1.1 722
AutoFact: PREDICTED: similar to helicase domain-containing protein n=1 Tax=Vitis vinifera RepID=UPI0001983869 0.0
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: helicase domain-containing protein 0.0
Internal
sp_v1.1_unigene31328 SustainPine v1.1 502
AutoFact: Os07g0681600 protein n=3 Tax=Oryza sativa RepID=Q7XHW1_ORYSJ 2.0e-35
FL-Next: sp=ATP-dependent DNA helicase Q-like SIM; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: atp-dependent dna helicase 6.40436e-37
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain