Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Helicase, superfamily 1/2, ATP-binding domain

Term: IPR014001  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene7495 SustainPine v1.1 2295
AutoFact: dead box ATP-dependent RNA helicase, putative; K13179 ATP-dependent RNA helicase DDX18 [EC:3.6.4.13] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene8911 SustainPine v1.1 1977
AutoFact: PREDICTED: similar to SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein n=1 Tax=Vitis vinifera RepID=UPI00019843BD 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: snf2 domain-containing protein helicase domain-containing protein ring finger domain-containing protein 0.0
Putative Complete
sp_v1.1_unigene9949 SustainPine v1.1 4283
AutoFact: [L] COG1112 Superfamily I DNA and RNA helicases and helicase subunits 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v1.1_unigene10101 SustainPine v1.1 1460
AutoFact: dead box ATP-dependent RNA helicase, putative; K12823 ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v1.1_unigene10741 SustainPine v1.1 1718
AutoFact: dead box ATP-dependent RNA helicase, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead box atp-dependent rna 0.0
Putative Complete
sp_v1.1_unigene11308 SustainPine v1.1 2399
AutoFact: dead box ATP-dependent RNA helicase, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene11593 SustainPine v1.1 1048
AutoFact: CHR929; chromatin remodeling complex subunit; K11665 DNA helicase INO80 [EC:3.6.1.-] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chromatin remodeling complex subunit 0.0
Putative N-terminus
sp_v1.1_unigene11610 SustainPine v1.1 3666
AutoFact: DEAD-box ATP-dependent RNA helicase 52B n=3 Tax=Oryza sativa RepID=RH52B_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene13213 SustainPine v1.1 415
AutoFact: Helicase, putative n=1 Tax=Ricinus communis RepID=B9SZG8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hua enhancer 2 0.0
Internal
sp_v1.1_unigene13298 SustainPine v1.1 456
AutoFact: [KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family 4.0e-18
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: chromatin remodelling complex atpase chain isw- 0.0
Internal
sp_v1.1_unigene13712 SustainPine v1.1 816
AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SS37_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box protein abstrakt 0.0
Internal
sp_v1.1_unigene13884 SustainPine v1.1 1663
AutoFact: dead box ATP-dependent RNA helicase, putative 0.0
FL-Next: sp=DEAD-box ATP-dependent RNA helicase 57; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: atp-dependent rna helicase 0.0
Complete
sp_v1.1_unigene14952 SustainPine v1.1 2025
AutoFact: Eukaryotic initiation factor 4A-1 n=14 Tax=Magnoliophyta RepID=IF4A1_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene15122 SustainPine v1.1 1542
AutoFact: dead box ATP-dependent RNA helicase, putative; K12823 ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene15214 SustainPine v1.1 2062
AutoFact: dead box ATP-dependent RNA helicase, putative; K03257 translation initiation factor eIF-4A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene15639 SustainPine v1.1 1927
AutoFact: dead box ATP-dependent RNA helicase, putative; K03257 translation initiation factor eIF-4A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene18216 SustainPine v1.1 807
AutoFact: Eukaryotic initiation factor 4A-13 (Fragment) n=5 Tax=core eudicotyledons RepID=IF413_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead box atp-dependent rna 0.0
N-terminus
sp_v1.1_unigene18234 SustainPine v1.1 597
AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SW84_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus
sp_v1.1_unigene18933 SustainPine v1.1 2581
AutoFact: nucleolar RNA helicase 2 0.0
FL-Next: sp=DEAD-box ATP-dependent RNA helicase 53; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene19117 SustainPine v1.1 1866
AutoFact: DEAD-box ATP-dependent RNA helicase 2 n=7 Tax=Poaceae RepID=RH2_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nicotiana eukaryotic translation initiation factor 4a 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain