Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: RNA polymerase I, Rpa2 specific

Term: IPR009674  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene36896 SustainPine v3.0 4146
• AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Vitis vinifera RepID=D7TX75_VITVI 0.0
• FL-Next: sp=DNA-directed RNA polymerase; Vitis vinifera (Grape). 0.0
• Sma3: DNA-directed RNA polymerase 3.937e-22
Complete
sp_v3.0_unigene64772 SustainPine v3.0 222
• AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Populus trichocarpa RepID=B9GLY1_POPTR 3.0e-13
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene66252 SustainPine v3.0 370
• AutoFact: DNA-directed RNA polymerase n=1 Tax=Vitis vinifera RepID=A5AMN9_VITVI 4.0e-25
• FL-Next: sp=DNA-directed RNA polymerase subunit beta; Pinus densiflora (Japanese red pine). Plastid; Chloroplast. 0.0
• Sma3: DNA-directed RNA polymerase 2.997e-39
Internal
sp_v3.0_unigene155384 SustainPine v3.0 247
• AutoFact: DNA-directed RNA polymerase, beta subunit family protein [Tetrahymena thermophila] gb|EAR82894.1| DNA-directed RNA polymerase, beta subunit family protein [Tetrahymena thermophila SB210] 1.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA-directed RNA polymerase 7.765e-15
Putative N-terminus
sp_v3.0_unigene162758 SustainPine v3.0 341
• AutoFact: DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T5Q2_PHYPA 3.0e-30
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB2; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Internal
sp_v3.0_unigene193150 SustainPine v3.0 607
• AutoFact: DNA-directed RNA polymerase n=1 Tax=Trichoplax adhaerens RepID=B3S2W9_TRIAD 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA-directed RNA polymerase 0.0
Putative Complete
sp_v3.0_unigene207719 SustainPine v3.0 724
• AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Vitis vinifera RepID=D7TX75_VITVI 4.0e-23
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain