Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Viral nucleic acid binding

Term: IPR008891  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene31259 SustainPine v3.0 1398
AutoFact: rve domain containing protein 5.0e-22
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00750; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Putative Complete
sp_v3.0_unigene42301 SustainPine v3.0 630
AutoFact: rve domain containing protein 9.0e-24
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00750; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Putative C-terminus
sp_v3.0_unigene45907 SustainPine v3.0 868
AutoFact: rve domain containing protein 1.0e-26
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00750; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Putative C-terminus
sp_v3.0_unigene47774 SustainPine v3.0 2475
AutoFact: rve multi-domain protein 1.0e-11
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00750; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Putative Complete
sp_v3.0_unigene47881 SustainPine v3.0 402
AutoFact: Integrase n=1 Tax=Populus trichocarpa RepID=Q0ZCD0_POPTR 5.0e-35
FL-Next: tr=Integrase; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene56302 SustainPine v3.0 184
AutoFact: Unassigned protein 1.0e-17
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene62801 SustainPine v3.0 323
AutoFact: Unassigned protein
FL-Next: tr=Integrase; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene65245 SustainPine v3.0 267
AutoFact: Retrotransposon gag protein n=1 Tax=Asparagus officinalis RepID=Q2AA50_ASPOF 4.0e-20
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Integrase 3.664e-09
Putative C-terminus
sp_v3.0_unigene66601 SustainPine v3.0 393
AutoFact: Integrase n=1 Tax=Populus trichocarpa RepID=Q0ZCD0_POPTR 6.0e-27
FL-Next: tr=Integrase; subsp. trichocarpa). 0.0
Sma3: Integrase 8.479e-07
Internal
sp_v3.0_unigene66614 SustainPine v3.0 368
AutoFact: Unassigned protein
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Integrase 3.076e-09
Putative C-terminus
sp_v3.0_unigene112118 SustainPine v3.0 340
AutoFact: Integrase n=1 Tax=Populus trichocarpa RepID=Q0ZCD0_POPTR 6.0e-28
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Putative Complete
sp_v3.0_unigene127738 SustainPine v3.0 662
AutoFact: Integrase n=1 Tax=Populus trichocarpa RepID=Q0ZCB7_POPTR 1.99993e-41
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene160115 SustainPine v3.0 489
AutoFact: Integrase n=1 Tax=Populus trichocarpa RepID=Q0ZCD0_POPTR 5.99994e-41
FL-Next: tr=Integrase; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene161556 SustainPine v3.0 311
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene161747 SustainPine v3.0 387
AutoFact: Integrase, catalytic region; Ribonuclease H n=1 Tax=Medicago truncatula RepID=Q2HW89_MEDTR 1.0e-29
FL-Next: tr=Probable integrase-common tobacco-related; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Sma3: Integrase 1.697e-06
Putative N-terminus
sp_v3.0_unigene196922 SustainPine v3.0 332
AutoFact: OSJNBa0091C12.6 protein n=2 Tax=Oryza sativa RepID=Q7XWS6_ORYSJ 2.0e-24
FL-Next: tr=Putative uncharacterized protein; Beta vulgaris (Sugar beet). 0.0
Internal
sp_v3.0_unigene199389 SustainPine v3.0 672
AutoFact: Integrase n=1 Tax=Populus trichocarpa RepID=Q0ZCB7_POPTR 1.0e-38
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00750; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain