Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Transcription factor, fork head, conserved site

Term: IPR018122  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene21812 SustainPine v3.0 649
• AutoFact: RVT_2 domain containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 8.371e-09
N-terminus
sp_v3.0_unigene35157 SustainPine v3.0 527
• AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 0.0
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 0.0
Internal
sp_v3.0_unigene40017 SustainPine v3.0 283
• AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 1.0e-23
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 4.234e-36
Internal
sp_v3.0_unigene51944 SustainPine v3.0 212
• AutoFact: Putative polyprotein n=2 Tax=Oryza sativa Japonica Group RepID=Q851Y3_ORYSJ 2.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.393e-08
Putative N-terminus
sp_v3.0_unigene53026 SustainPine v3.0 470
• AutoFact: Putative gag-pol polyprotein n=1 Tax=Fragaria x ananassa RepID=C6GFP7_FRAAN 6.0e-35
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 9.153e-16
Internal
sp_v3.0_unigene53612 SustainPine v3.0 297
• AutoFact: Polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9AUZ1_ARATH 7.0e-23
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.503e-36
Internal
sp_v3.0_unigene53826 SustainPine v3.0 411
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Cycas revoluta RepID=Q4JQ46_CYCRE 8.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 0.0
Internal
sp_v3.0_unigene55540 SustainPine v3.0 318
• AutoFact: pfam00665, rve, Integrase core domain 3.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 7.377e-08
Internal
sp_v3.0_unigene56740 SustainPine v3.0 500
• AutoFact: Putative copia-type polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q9FWI2_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.687e-35
N-terminus
sp_v3.0_unigene57935 SustainPine v3.0 352
• AutoFact: Gag-protease-integrase-RT-RNaseH polyprotein n=1 Tax=Glycine max RepID=B5U9F7_SOYBN 2.0e-12
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene58601 SustainPine v3.0 412
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene59367 SustainPine v3.0 293
• AutoFact: rve domain containing protein 8.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Transposon protein, putative, unclassified 1.359e-08
Internal
sp_v3.0_unigene59528 SustainPine v3.0 219
• AutoFact: Putative polyprotein n=2 Tax=Oryza sativa Japonica Group RepID=Q851Y3_ORYSJ 8.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene62221 SustainPine v3.0 128
• AutoFact: Gag-protease-integrase-RT-RNaseH polyprotein n=1 Tax=Glycine max RepID=B5U9F7_SOYBN 1.0e-11
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene65149 SustainPine v3.0 190
• AutoFact: Putative polyprotein n=2 Tax=Oryza sativa Japonica Group RepID=Q851Y3_ORYSJ 9.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 7.825e-11
Putative N-terminus
sp_v3.0_unigene66746 SustainPine v3.0 223
• AutoFact: Putative gag-pol polyprotein n=1 Tax=Citrus sinensis RepID=Q18L98_CITSI 4.0e-14
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 4.038e-10
Internal
sp_v3.0_unigene68079 SustainPine v3.0 353
• AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 6.0e-38
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 5.412e-39
Internal
sp_v3.0_unigene72318 SustainPine v3.0 258
• AutoFact: Gag-protease-integrase-RT-RNaseH polyprotein n=1 Tax=Glycine max RepID=B5U9F7_SOYBN 1.0e-17
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene72854 SustainPine v3.0 285
• AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 8.0e-22
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.4013e-45
Internal
sp_v3.0_unigene73094 SustainPine v3.0 343
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY11_PICAB 2.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Reverse transcriptase 2.957e-07
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain