Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Protein of unknown function DUF594

Term: IPR007658  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene163697 SustainPine v3.0 310
AutoFact: RVT_2 domain containing protein 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Polyprotein, putative 1.765e-07
Internal
sp_v3.0_unigene164316 SustainPine v3.0 234
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene165584 SustainPine v3.0 349
AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 5.0e-30
FL-Next: tr=Polyprotein; Primula vulgaris. 0.0
Sma3: Pol protein integrase region 6.854e-25
Internal
sp_v3.0_unigene166626 SustainPine v3.0 193
AutoFact: Putative polyprotein n=1 Tax=Zea mays RepID=Q8SA93_MAIZE 2.0e-18
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, unclassified 7.858e-20
Putative C-terminus
sp_v3.0_unigene186851 SustainPine v3.0 437
AutoFact: Gag-pol polyprotein, putative n=1 Tax=Solanum demissum RepID=Q6L3Y5_SOLDE 3.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene187426 SustainPine v3.0 450
AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SQW9_ARATH 3.00018e-42
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 4.176e-21
N-terminus
sp_v3.0_unigene187553 SustainPine v3.0 552
AutoFact: Polyprotein n=1 Tax=Glycine max RepID=Q84ZV5_SOYBN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 4.101e-21
Putative Complete
sp_v3.0_unigene188459 SustainPine v3.0 325
AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 1.0e-26
FL-Next: tr=Polyprotein; Primula vulgaris. 0.0
Sma3: Retrotransposon protein, putative, unclassified 6.859e-23
Internal
sp_v3.0_unigene189430 SustainPine v3.0 299
AutoFact: Putative retroelement n=1 Tax=Oryza sativa Japonica Group RepID=Q8H7X6_ORYSJ 1.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, unclassified 1.72e-16
Putative Complete
sp_v3.0_unigene189881 SustainPine v3.0 346
AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SQW9_ARATH 2.0e-36
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, unclassified 9.588e-20
Putative C-terminus
sp_v3.0_unigene196899 SustainPine v3.0 334
AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 3.0e-27
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Pol protein integrase region 1.499e-13
Internal
sp_v3.0_unigene201925 SustainPine v3.0 931
AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Pol protein integrase region 0.0
Internal
sp_v3.0_unigene202559 SustainPine v3.0 546
AutoFact: Pol protein integrase region (Fragment) n=6 Tax=Spermatophyta RepID=Q9M6N3_9CONI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pol protein integrase region 0.0
Putative Complete
sp_v3.0_unigene204073 SustainPine v3.0 366
AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 3.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.991e-13
C-terminus
sp_v3.0_unigene204749 SustainPine v3.0 293
AutoFact: Pol protein integrase region (Fragment) n=6 Tax=Spermatophyta RepID=Q9M6N3_9CONI 1.0e-26
FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Pol protein integrase region 0.0
Internal
sp_v3.0_unigene206584 SustainPine v3.0 515
AutoFact: RVT_2 domain containing protein 8.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 7.432e-10
Putative C-terminus
sp_v3.0_unigene207370 SustainPine v3.0 357
AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 1.0e-31
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, unclassified 6.093e-16
Putative C-terminus
sp_v3.0_unigene207417 SustainPine v3.0 266
AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa RepID=Q10RT1_ORYSJ 2.0e-25
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Polyprotein 8.062e-13
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain