Sustainpine_db
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Name: LDLR class B repeat

Term: IPR000033  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene14431 SustainPine v3.0 702
AutoFact: haloacid dehalogenase-like hydrolase domain-containing protein [Arabidopsis thaliana] gb|AAL38840.1| unknown protein [Arabidopsis thaliana] gb|AEE33400.1| haloacid dehalogenase-like hydrolase domain-containing protein [Arabidopsis thaliana] 4.0e-26
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
C-terminus
sp_v3.0_unigene20015 SustainPine v3.0 621
AutoFact: pfam08534, Redoxin, Redoxin 1.0e-06
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene65258 SustainPine v3.0 94
AutoFact: Haloacid dehalogenase-like hydrolase domain-containing protein n=6 Tax=Arabidopsis RepID=Q8VZ10_ARATH 7.0e-07
FL-Next: tr=Haloacid dehalogenase-like hydrolase domain-containing protein; Arabidopsis halleri subsp. halleri (Arabis halleri). 0.0
Sma3: HAD-superfamily hydrolase, subfamily IA, variant 3 containing protein, expressed 3.681e-08
Internal
sp_v3.0_unigene79622 SustainPine v3.0 212
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: HAD-superfamily hydrolase, subfamily IA, variant 3 containing protein, expressed 4.296e-08
Internal
sp_v3.0_unigene108247 SustainPine v3.0 286
AutoFact: Haloacid dehalogenase-like hydrolase domain-containing protein n=6 Tax=Arabidopsis RepID=Q8VZ10_ARATH 2.0e-32
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene122945 SustainPine v3.0 148
AutoFact: haloacid dehalogenase-like hydrolase domain-containing protein [Arabidopsis thaliana] gb|AAL38840.1| unknown protein [Arabidopsis thaliana] gb|AEE33400.1| haloacid dehalogenase-like hydrolase domain-containing protein [Arabidopsis thaliana] 4.0e-16
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Sma3: HAD-superfamily hydrolase, subfamily IA, variant 3 containing protein, expressed 4.755e-08
Internal
sp_v3.0_unigene184691 SustainPine v3.0 349
AutoFact: 2-deoxyglucose-6-phosphate phosphatase, putative n=1 Tax=Ricinus communis RepID=B9RFK4_RICCO 1.0e-24
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain