Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Transcription-repair-coupling factor domain

Term: IPR005118  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene12617 SustainPine v3.0 896
AutoFact: putative helicase [Arabidopsis thaliana] 2.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: CarD-like transcriptional regulator family protein, expressed 4.361e-09
Complete
sp_v3.0_unigene15839 SustainPine v3.0 1160
AutoFact: putative DEAD/DEAH box helicase [Arabidopsis thaliana] gb|AAF14851.1|AC011664_33 putative helicase [Arabidopsis thaliana] gb|AEE73755.1| putative DEAD/DEAH box helicase [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: CarD-like transcriptional regulator family protein, expressed 4.755e-09
Putative N-terminus
sp_v3.0_unigene43353 SustainPine v3.0 141
AutoFact: putative helicase [Arabidopsis thaliana] 3.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene43565 SustainPine v3.0 137
AutoFact: putative helicase [Arabidopsis thaliana] 1.0e-10
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene44449 SustainPine v3.0 520
AutoFact: putative helicase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: CarD-like transcriptional regulator family protein, expressed 8.439e-09
Putative N-terminus
sp_v3.0_unigene56908 SustainPine v3.0 212
AutoFact: Helicase, C-terminal; Haem peroxidase, plant/fungal/bacterial (Fragment) n=1 Tax=Medicago truncatula RepID=Q2HRX1_MEDTR 3.0e-28
FL-Next: tr=Transcription-repair-coupling factor; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Sma3: CarD-like transcriptional regulator family protein, expressed 4.688e-09
Internal
sp_v3.0_unigene106771 SustainPine v3.0 398
AutoFact: putative helicase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: CarD-like transcriptional regulator family protein, expressed 6.985e-09
Internal
sp_v3.0_unigene111052 SustainPine v3.0 295
AutoFact: putative helicase [Arabidopsis thaliana] 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: CarD-like transcriptional regulator family protein, expressed 4.688e-09
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain