Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Thiamine biosynthesis protein ThiC

Term: IPR002817  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene12100 SustainPine v3.0 636
AutoFact: Tetratricopeptide-like helical [Medicago truncatula] 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 1.578e-33
C-terminus
sp_v3.0_unigene35692 SustainPine v3.0 1128
AutoFact: putative thiamin biosynthesis protein [Oryza sativa Japonica Group] 3.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene37858 SustainPine v3.0 3097
AutoFact: Catalytic, putative n=2 Tax=Malpighiales RepID=B9SHY3_RICCO 0.0
FL-Next: sp=Phosphomethylpyrimidine synthase, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Catalytic, putative 0.0
Complete
sp_v3.0_unigene49041 SustainPine v3.0 189
AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Picea abies RepID=B3U1V1_PICAB 8.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 0.0
Internal
sp_v3.0_unigene52072 SustainPine v3.0 237
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580 gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana] gb|AAO42278.1| unknown pro 8.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 0.0
Putative C-terminus
sp_v3.0_unigene53235 SustainPine v3.0 269
AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Picea abies RepID=B3U1V1_PICAB 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 0.0
Putative C-terminus
sp_v3.0_unigene53500 SustainPine v3.0 262
AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Picea abies RepID=B3U1V1_PICAB 7.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 0.0
Internal
sp_v3.0_unigene53545 SustainPine v3.0 421
AutoFact: Pentatricopeptide repeat protein 65 n=2 Tax=Funariaceae RepID=F5CAD8_FUNHY 1.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 0.0
C-terminus
sp_v3.0_unigene53815 SustainPine v3.0 149
AutoFact: thiamine biosynthesis protein ThiC [Arabidopsis thaliana] ref|NP_850135.1| thiamine biosynthesis protein ThiC [Arabidopsis thaliana] ref|NP_001189634.1| thiamine biosynthesis protein ThiC [Arabidopsis thaliana] gb|AAC35232.1| putative thiamin biosynthesis 7.0e-09
FL-Next: sp=Phosphomethylpyrimidine synthase, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative thiamin biosynthesis protein 1.082e-09
Internal
sp_v3.0_unigene58747 SustainPine v3.0 279
AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Picea abies RepID=B3U1V1_PICAB 2.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 0.0
Internal
sp_v3.0_unigene58770 SustainPine v3.0 319
AutoFact: Os03g0235200 protein n=2 Tax=Oryza sativa RepID=Q10PG4_ORYSJ 1.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 6.783e-29
C-terminus
sp_v3.0_unigene61426 SustainPine v3.0 308
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070 gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana] gb|AEC07259.1| pentatricopeptide repe 7.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide, putative, expressed 2.959e-12
C-terminus
sp_v3.0_unigene61622 SustainPine v3.0 294
AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Picea abies RepID=B3U1V1_PICAB 7.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 0.0
Internal
sp_v3.0_unigene61667 SustainPine v3.0 292
AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Cycas revoluta RepID=B3U1U8_CYCRE 9.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 0.0
Internal
sp_v3.0_unigene63990 SustainPine v3.0 180
AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Lepidogyna hodgsoniae RepID=B3U1Z4_9MARC 6.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 0.0
Internal
sp_v3.0_unigene64826 SustainPine v3.0 241
AutoFact: Catalytic, putative n=2 Tax=Malpighiales RepID=B9SHY3_RICCO 3.0e-21
FL-Next: sp=Phosphomethylpyrimidine synthase, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative thiamin biosynthesis protein 1.248e-09
Internal
sp_v3.0_unigene64883 SustainPine v3.0 213
AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Picea abies RepID=B3U1V1_PICAB 2.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 0.0
Internal
sp_v3.0_unigene65146 SustainPine v3.0 133
AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Cycas revoluta RepID=B3U1U9_CYCRE 4.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 0.0
Internal
sp_v3.0_unigene67028 SustainPine v3.0 363
AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Picea abies RepID=B3U1V0_PICAB 1.00053e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 0.0
Internal
sp_v3.0_unigene68550 SustainPine v3.0 286
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain