Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: S15/NS1, RNA-binding

Term: IPR009068  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene59421 SustainPine v3.0 417
AutoFact: Polyprotein n=1 Tax=Glycine max RepID=Q84ZV5_SOYBN 4.0e-27
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Retrotransposon protein, putative, unclassified 5.962e-06
Internal
sp_v3.0_unigene59603 SustainPine v3.0 316
AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 4.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.142e-25
Putative Complete
sp_v3.0_unigene60019 SustainPine v3.0 311
AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 4.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Polyprotein 7.141e-08
Putative Complete
sp_v3.0_unigene60302 SustainPine v3.0 375
AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SQW9_ARATH 2.0e-31
FL-Next: tr=Putative retroelement pol polyprotein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Pol protein integrase region 8.071e-25
Internal
sp_v3.0_unigene61349 SustainPine v3.0 327
AutoFact: Unassigned protein
FL-Next: tr=Disease resistance protein; pekinensis). 0.0
Sma3: Polyprotein 7.125e-14
Internal
sp_v3.0_unigene61577 SustainPine v3.0 332
AutoFact: Polyprotein n=1 Tax=Glycine max RepID=Q84ZV5_SOYBN 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Putative plant disease resistance polyprotein 3.227e-08
Internal
sp_v3.0_unigene62036 SustainPine v3.0 320
AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 1.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative polyprotein 5.005e-28
Putative Complete
sp_v3.0_unigene62606 SustainPine v3.0 258
AutoFact: 40S ribosomal protein S13, putative [Solanum demissum] 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S13 2.047e-17
Internal
sp_v3.0_unigene63026 SustainPine v3.0 273
AutoFact: polyprotein [Glycine max] 3.0e-20
FL-Next: tr=Disease resistance protein; pekinensis). 0.0
Sma3: Retrotransposon protein, putative, unclassified 8.419e-17
Internal
sp_v3.0_unigene64290 SustainPine v3.0 206
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Taxus baccata RepID=Q56GF5_TAXBA 2.0e-10
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Reverse transcriptase 5.134e-16
Internal
sp_v3.0_unigene65995 SustainPine v3.0 264
AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, unclassified 3.101e-08
Putative Complete
sp_v3.0_unigene66304 SustainPine v3.0 418
AutoFact: Pol protein integrase region (Fragment) n=6 Tax=Spermatophyta RepID=Q9M6N3_9CONI 3.0e-37
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Pol protein integrase region 0.0
Internal
sp_v3.0_unigene67441 SustainPine v3.0 194
AutoFact: polyprotein [Primula vulgaris] 5.0e-12
FL-Next: tr=H0124B04.16 protein; Oryza sativa (Rice). 0.0
Internal
sp_v3.0_unigene68606 SustainPine v3.0 240
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q53NJ3_ORYSJ 3.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, unclassified 3.994e-07
Putative Complete
sp_v3.0_unigene70718 SustainPine v3.0 268
AutoFact: Pol protein (Fragment) n=2 Tax=Picea abies RepID=Q9M6P0_PICAB 5.0e-16
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Pol protein 4.99e-06
Internal
sp_v3.0_unigene72102 SustainPine v3.0 268
AutoFact: 40S ribosomal protein S13-1 n=22 Tax=core eudicotyledons RepID=RS131_ARATH 2.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S13 3.65e-18
Internal
sp_v3.0_unigene73621 SustainPine v3.0 293
AutoFact: Gag-pol polyprotein n=1 Tax=Silene latifolia RepID=E7BQD4_SILLA 2.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.451e-16
Putative Complete
sp_v3.0_unigene79574 SustainPine v3.0 203
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Ginkgo biloba RepID=O82684_GINBI 4.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Reverse transcriptase 0.0
Putative C-terminus
sp_v3.0_unigene96174 SustainPine v3.0 842
AutoFact: Pol protein (Fragment) n=2 Tax=Picea abies RepID=Q9M6P0_PICAB 0.0
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Polyprotein 4.883e-15
C-terminus
sp_v3.0_unigene100415 SustainPine v3.0 469
AutoFact: rve domain containing protein 1.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 3.015e-14
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain