Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Intron-encoded nuclease 2

Term: IPR003611  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene144182 SustainPine v3.0 360
AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold n=1 Tax=Medicago truncatula RepID=A2Q2C7_MEDTR 8.0e-33
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 7.747e-36
Putative N-terminus
sp_v3.0_unigene144517 SustainPine v3.0 702
AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold n=1 Tax=Medicago truncatula RepID=A2Q2C7_MEDTR 0.0
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Putative retroelement 6.164e-17
Putative Complete
sp_v3.0_unigene144834 SustainPine v3.0 559
AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa RepID=Q10RT1_ORYSJ 0.0
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 8.99e-38
Putative Complete
sp_v3.0_unigene144865 SustainPine v3.0 716
AutoFact: OSJNBa0054D14.1 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7XW39_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Pol protein integrase region 1.726e-16
Putative C-terminus
sp_v3.0_unigene145028 SustainPine v3.0 305
AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH 6.0e-25
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, unclassified 1.021e-15
Internal
sp_v3.0_unigene145118 SustainPine v3.0 434
AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold [Medicago truncatula] 5.99994e-41
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 3.921e-20
Putative N-terminus
sp_v3.0_unigene147960 SustainPine v3.0 455
AutoFact: polyprotein [Primula vulgaris] 2.0e-35
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, unclassified 1.852e-17
C-terminus
sp_v3.0_unigene148873 SustainPine v3.0 186
AutoFact: Unassigned protein
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Internal
sp_v3.0_unigene149111 SustainPine v3.0 137
AutoFact: T18A20.4 protein n=3 Tax=Arabidopsis thaliana RepID=Q9SSB2_ARATH 1.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene149560 SustainPine v3.0 163
AutoFact: Putative polyprotein n=1 Tax=Zea mays RepID=Q8SA93_MAIZE 5.0e-18
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, unclassified 1.28e-14
Internal
sp_v3.0_unigene160294 SustainPine v3.0 471
AutoFact: Unassigned protein
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
C-terminus
sp_v3.0_unigene160907 SustainPine v3.0 344
AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SQW9_ARATH 5.0e-29
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.276e-17
Putative N-terminus
sp_v3.0_unigene161196 SustainPine v3.0 521
AutoFact: RVT_2 domain containing protein 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 1.828e-09
N-terminus
sp_v3.0_unigene161256 SustainPine v3.0 488
AutoFact: Unassigned protein
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Polyprotein 1.524e-13
C-terminus
sp_v3.0_unigene161510 SustainPine v3.0 482
AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH 2.8026e-45
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, unclassified 1.467e-17
C-terminus
sp_v3.0_unigene161749 SustainPine v3.0 373
AutoFact: OSJNBa0054D14.1 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7XW39_ORYSJ 5.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 7.999e-26
Putative Complete
sp_v3.0_unigene161753 SustainPine v3.0 356
AutoFact: Putative polyprotein n=1 Tax=Zea mays RepID=Q8SA93_MAIZE 2.0e-38
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.127e-20
C-terminus
sp_v3.0_unigene161819 SustainPine v3.0 347
AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SL06_ARATH 1.0e-18
FL-Next: tr=Putative uncharacterized protein OSJNBa0042F15.18; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene161820 SustainPine v3.0 253
AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa RepID=Q10RT1_ORYSJ 2.0e-22
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 7.698e-13
Putative C-terminus
sp_v3.0_unigene162252 SustainPine v3.0 296
AutoFact: polyprotein [Glycine max] 1.0e-19
FL-Next: tr=Disease resistance protein; pekinensis). 0.0
Sma3: Retrotransposon protein, putative, unclassified 4.516e-19
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain