Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, U1-C type

Term: IPR013085  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene8981 SustainPine v3.0 1513
AutoFact: PREDICTED: similar to putative C-type U1 snRNP n=1 Tax=Vitis vinifera RepID=UPI00019837D4 1.99965e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene9367 SustainPine v3.0 1874
AutoFact: PREDICTED: similar to putative C-type U1 snRNP n=1 Tax=Vitis vinifera RepID=UPI00019837D4 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene18323 SustainPine v3.0 893
AutoFact: zinc finger, matrin type 5 [Danio rerio] 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene23497 SustainPine v3.0 1040
AutoFact: C2H2 and C2HC zinc finger protein [Arabidopsis thaliana] gb|AAQ22665.1| At1g49590 [Arabidopsis thaliana] gb|AEE32445.1| C2H2 and C2HC zinc finger protein [Arabidopsis thaliana] 5.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene52366 SustainPine v3.0 362
AutoFact: zinc finger, matrin type 5 [Danio rerio] 3.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene54351 SustainPine v3.0 351
AutoFact: zinc finger, matrin type 5 [Danio rerio] 5.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene60696 SustainPine v3.0 371
AutoFact: PREDICTED: similar to putative C-type U1 snRNP n=1 Tax=Vitis vinifera RepID=UPI00019837D4 7.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene74356 SustainPine v3.0 491
AutoFact: zinc finger, matrin type 5 [Danio rerio] 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene95499 SustainPine v3.0 803
AutoFact: Zinc finger CCCH domain-containing protein 3 n=3 Tax=Oryza sativa RepID=C3H3_ORYSJ 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene100389 SustainPine v3.0 717
AutoFact: Unassigned protein 8.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene151548 SustainPine v3.0 134
AutoFact: PREDICTED: similar to putative C-type U1 snRNP n=1 Tax=Vitis vinifera RepID=UPI00019837D4 2.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene155415 SustainPine v3.0 553
AutoFact: U1 small nuclear ribonucleoprotein C n=1 Tax=Salmo salar RepID=B5XBE7_SALSA 5.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene194746 SustainPine v3.0 420
AutoFact: Unassigned protein 4.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain