Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: LUC7-related

Term: IPR004882  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene8728 SustainPine v3.0 2371
AutoFact: sarcoplasmic reticulum protein-like protein [Oryza sativa Japonica Group] gb|AAS07364.1| sarcoplasmic reticulum protein (with alternative splicing) [Oryza sativa Japonica Group] gb|ABF99835.1| RNA-binding protein Luc7-like 2, putative, expressed [Oryza sa 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene17984 SustainPine v3.0 1189
AutoFact: LUC7 related protein [Arabidopsis thaliana] gb|AAK96571.1| AT5g17440/K3M16_10 [Arabidopsis thaliana] gb|AAL36075.1| AT5g17440/K3M16_10 [Arabidopsis thaliana] gb|AED92426.1| LUC7 related protein [Arabidopsis thaliana] 6.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene25491 SustainPine v3.0 2157
AutoFact: LUC7 related protein [Arabidopsis thaliana] gb|AAK96571.1| AT5g17440/K3M16_10 [Arabidopsis thaliana] gb|AAL36075.1| AT5g17440/K3M16_10 [Arabidopsis thaliana] gb|AED92426.1| LUC7 related protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene30464 SustainPine v3.0 1163
AutoFact: pfam03194, LUC7, LUC7 N_terminus 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene116071 SustainPine v3.0 520
AutoFact: DUF1777 multi-domain protein 1.0e-17
coding
sp_v3.0_unigene143906 SustainPine v3.0 594
AutoFact: U1 snRNP-interacting 70 kDa protein [Triticum aestivum] 2.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: U1 small nuclear ribonucleoprotein 2.001e-08
N-terminus
sp_v3.0_unigene146594 SustainPine v3.0 493
AutoFact: S-adenosylmethionine decarboxylase proenzyme n=2 Tax=Picea sitchensis RepID=B8LQ15_PICSI 8.0e-33
FL-Next: sp=S-adenosylmethionine decarboxylase proenzyme; Pinus sylvestris (Scots pine). 0.0
Sma3: S-adenosylmethionine decarboxylase 0.0
Misassembled
sp_v3.0_unigene150186 SustainPine v3.0 298
AutoFact: LUC7 related protein [Arabidopsis thaliana] gb|AEE73931.1| LUC7 related protein [Arabidopsis thaliana] 1.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain