Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Rhodopsin, retinal binding site

Term: IPR018229  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene8337 SustainPine v3.0 3431
AutoFact: glutamate synthase 1 [NADH] [Arabidopsis thaliana] ref|NP_001190529.1| glutamate synthase 1 [NADH] [Arabidopsis thaliana] ref|NP_001190530.1| glutamate synthase 1 [NADH] [Arabidopsis thaliana] sp|Q9LV03.2|GLUT1_ARATH RecName: Full=Glutamate synthase 1 [NA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutamate synthase 1.622e-09
Complete
sp_v3.0_unigene9093 SustainPine v3.0 2563
AutoFact: glutamate synthase 1 [NADH] [Arabidopsis thaliana] ref|NP_001190529.1| glutamate synthase 1 [NADH] [Arabidopsis thaliana] ref|NP_001190530.1| glutamate synthase 1 [NADH] [Arabidopsis thaliana] sp|Q9LV03.2|GLUT1_ARATH RecName: Full=Glutamate synthase 1 [NA 0.0
FL-Next: sp=Glutamate synthase 1 [NADH], chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: NADH glutamate synthase 6.97e-11
N-terminus
sp_v3.0_unigene9110 SustainPine v3.0 3286
AutoFact: ferredoxin-dependent glutamate synthase [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutamate synthase 9.944e-31
Complete
sp_v3.0_unigene22046 SustainPine v3.0 1106
AutoFact: Glutamate synthase, putative n=1 Tax=Ricinus communis RepID=B9RII5_RICCO 0.0
FL-Next: sp=Glutamate synthase 1 [NADH], chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glutamate synthase 3.095e-35
Internal
sp_v3.0_unigene69183 SustainPine v3.0 145
AutoFact: aminopeptidase/ hydrolase; K01262 X-Pro aminopeptidase [EC:3.4.11.9] 5.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene94838 SustainPine v3.0 448
AutoFact: Xaa-pro aminopeptidase, putative n=1 Tax=Ricinus communis RepID=B9RF64_RICCO 6.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene95409 SustainPine v3.0 418
AutoFact: [E] COG0006 Xaa-Pro aminopeptidase 2.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene129913 SustainPine v3.0 494
AutoFact: Glutamate synthase 1 [NADH], chloroplastic n=2 Tax=Arabidopsis RepID=GLUT1_ARATH 0.0
FL-Next: sp=Glutamate synthase 1 [NADH], chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: NADH glutamate synthase 2.142e-11
Internal
sp_v3.0_unigene135843 SustainPine v3.0 226
AutoFact: Glutamate synthase, putative n=1 Tax=Ricinus communis RepID=B9RII5_RICCO 7.0e-24
FL-Next: sp=Glutamate synthase 1 [NADH], chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: NADH-dependent glutamate synthase 5.645e-09
Internal
sp_v3.0_unigene136544 SustainPine v3.0 328
AutoFact: Glutamate synthase 1 [NADH], chloroplastic n=12 Tax=Poaceae RepID=GLT1_ORYSJ 1.0e-39
FL-Next: sp=Glutamate synthase 1 [NADH], chloroplastic; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: NADH-dependent glutamate synthase 5.89e-09
Internal
sp_v3.0_unigene143244 SustainPine v3.0 446
AutoFact: putative Xaa-Pro aminopeptidase 2 [Oryza sativa Japonica Group] gb|EEE66177.1| hypothetical protein OsJ_22272 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xaa-pro aminopeptidase, putative 1.431e-08
Internal
sp_v3.0_unigene150765 SustainPine v3.0 422
AutoFact: PREDICTED: similar to X-prolyl aminopeptidase (aminopeptidase P) 1, soluble [Strongylocentrotus purpuratus] ref|XP_001190029.1| PREDICTED: similar to X-prolyl aminopeptidase (aminopeptidase P) 1, soluble [Strongylocentrotus purpuratus] 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene154581 SustainPine v3.0 325
AutoFact: Ferredoxin-dependent glutamate synthase, fusion of large and small subunits n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7GAZ5_PHATC 5.0e-35
FL-Next: sp=Glutamate synthase 1 [NADH], chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glutamate synthase 8.036e-13
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain