Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Pre-mRNA-processing-splicing factor 8

Term: IPR012591  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene7464 SustainPine v3.0 1391
• AutoFact: putative splicing factor Prp8 [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene35135 SustainPine v3.0 567
• AutoFact: Pre-mRNA-processing-splicing factor [Arabidopsis thaliana] gb|AAD55467.1|AC009322_7 Putative splicing factor Prp8 [Arabidopsis thaliana] gb|AEE36353.1| Pre-mRNA-processing-splicing factor [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Internal
sp_v3.0_unigene48497 SustainPine v3.0 273
• AutoFact: Pre-mRNA-processing-splicing factor [Arabidopsis thaliana] gb|AAD55467.1|AC009322_7 Putative splicing factor Prp8 [Arabidopsis thaliana] gb|AEE36353.1| Pre-mRNA-processing-splicing factor [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein Sb10g004682; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Internal
sp_v3.0_unigene52751 SustainPine v3.0 83
• AutoFact: Splicing factor-like protein n=7 Tax=Embryophyta RepID=Q9T0I6_ARATH 2.0e-06
• FL-Next: tr=Pre-mRNA-processing-splicing factor; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene62369 SustainPine v3.0 250
• AutoFact: putative splicing factor Prp8 [Oryza sativa Japonica Group] 4.0e-37
• FL-Next: tr=Putative uncharacterized protein Sb10g004682; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Internal
sp_v3.0_unigene62542 SustainPine v3.0 232
• AutoFact: Pre-mRNA-processing-splicing factor [Arabidopsis thaliana] gb|AAD55467.1|AC009322_7 Putative splicing factor Prp8 [Arabidopsis thaliana] gb|AEE36353.1| Pre-mRNA-processing-splicing factor [Arabidopsis thaliana] 4.0e-36
• FL-Next: tr=Putative uncharacterized protein Sb10g004682; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Putative N-terminus
sp_v3.0_unigene64087 SustainPine v3.0 211
• AutoFact: Splicing factor-like protein n=7 Tax=Embryophyta RepID=Q9T0I6_ARATH 1.0e-31
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene81594 SustainPine v3.0 181
• AutoFact: Pre-mRNA-processing-splicing factor [Arabidopsis thaliana] gb|AAD55467.1|AC009322_7 Putative splicing factor Prp8 [Arabidopsis thaliana] gb|AEE36353.1| Pre-mRNA-processing-splicing factor [Arabidopsis thaliana] 3.0e-20
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene101189 SustainPine v3.0 487
• AutoFact: Splicing factor-like protein n=7 Tax=Embryophyta RepID=Q9T0I6_ARATH 0.0
• FL-Next: tr=Splicing factor-like protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Putative splicing factor Prp8 3.392e-09
Internal
sp_v3.0_unigene102700 SustainPine v3.0 390
• AutoFact: Pre-mRNA-processing-splicing factor [Arabidopsis thaliana] gb|AAD55467.1|AC009322_7 Putative splicing factor Prp8 [Arabidopsis thaliana] gb|AEE36353.1| Pre-mRNA-processing-splicing factor [Arabidopsis thaliana] 0.0
• FL-Next: tr=Os06g0167000 protein; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene107268 SustainPine v3.0 184
• AutoFact: putative splicing factor Prp8 [Oryza sativa Japonica Group] 1.0e-20
• FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Internal
sp_v3.0_unigene112731 SustainPine v3.0 304
• AutoFact: Pre-mRNA-processing-splicing factor [Arabidopsis thaliana] gb|AAD55467.1|AC009322_7 Putative splicing factor Prp8 [Arabidopsis thaliana] gb|AEE36353.1| Pre-mRNA-processing-splicing factor [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Internal
sp_v3.0_unigene138476 SustainPine v3.0 303
unknown
sp_v3.0_unigene150291 SustainPine v3.0 199
• AutoFact: PREDICTED: similar to pre-mRNA processing factor 8 n=2 Tax=Strongylocentrotus purpuratus RepID=UPI0000E49E8D 4.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Splicing factor, component of the U5 snRNP and of the spliceosome 4.386e-06
C-terminus
sp_v3.0_unigene153465 SustainPine v3.0 312
• AutoFact: Pre-mRNA-processing-splicing factor 8 n=2 Tax=Oomycetes RepID=D0NFV2_PHYIT 5.0e-23
• FL-Next: tr=PREDICTED: similar to CG8877PA putative; Albugo laibachii Nc14. 0.0
Internal
sp_v3.0_unigene155016 SustainPine v3.0 412
• AutoFact: PREDICTED: pre-mRNA-processing-splicing factor 8-like [Apis mellifera] 4.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene156711 SustainPine v3.0 145
• AutoFact: Os05g0163200 protein (Fragment) n=1 Tax=Oryza sativa Japonica Group RepID=Q0DKH5_ORYSJ 1.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene158118 SustainPine v3.0 313
• AutoFact: Pre-mRNA-processing-splicing factor 8 n=2 Tax=Oomycetes RepID=D0NFV2_PHYIT 5.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene158876 SustainPine v3.0 359
• AutoFact: Similar to splicing factor Prp8 n=1 Tax=Ectocarpus siliculosus RepID=D8LLJ8_ECTSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene163230 SustainPine v3.0 355
• AutoFact: Pre-mRNA-processing-splicing factor [Arabidopsis thaliana] gb|AAD55467.1|AC009322_7 Putative splicing factor Prp8 [Arabidopsis thaliana] gb|AEE36353.1| Pre-mRNA-processing-splicing factor [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein Sb10g004682; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain