Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ku70/Ku80, N-terminal alpha/beta

Term: IPR005161  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene6372 SustainPine v3.0 2622
AutoFact: Ku70 homolog [Populus nigra] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ku70-like protein 4.296e-09
Complete
sp_v3.0_unigene13028 SustainPine v3.0 934
AutoFact: Ku P80 DNA helicase, putative n=1 Tax=Ricinus communis RepID=B9RDD3_RICCO 8.0e-39
FL-Next: tr=KU80-like protein; Pinus sylvestris (Scots pine). 0.0
C-terminus
sp_v3.0_unigene15329 SustainPine v3.0 1055
AutoFact: RecName: Full=ATP-dependent DNA helicase 2 subunit KU80; AltName: Full=ATP-dependent DNA helicase 2 subunit 2; AltName: Full=ATP-dependent DNA helicase II 80 kDa subunit gb|AAS01977.1| putative H-box binding protein, KAP2, with alternative splicing isofor 2.0e-22
FL-Next: tr=KU80-like protein; Pinus sylvestris (Scots pine). 0.0
Sma3: KAP-2 5.087e-09
C-terminus
sp_v3.0_unigene61294 SustainPine v3.0 244
AutoFact: KU80-like protein (Fragment) n=1 Tax=Pinus sylvestris RepID=B1PYP3_PINSY 8.0e-09
FL-Next: tr=KU80-like protein; Pinus sylvestris (Scots pine). 0.0
Sma3: KU80-like protein 1.462e-06
N-terminus
sp_v3.0_unigene62996 SustainPine v3.0 198
AutoFact: RecName: Full=ATP-dependent DNA helicase 2 subunit KU80; AltName: Full=ATP-dependent DNA helicase 2 subunit 2; AltName: Full=ATP-dependent DNA helicase II 80 kDa subunit gb|AAS01977.1| putative H-box binding protein, KAP2, with alternative splicing isofor 8.0e-17
FL-Next: tr=KU80-like protein; Pinus sylvestris (Scots pine). 0.0
Sma3: KAP-2 2.848e-13
Internal
sp_v3.0_unigene77832 SustainPine v3.0 396
AutoFact: KU80-like protein (Fragment) n=1 Tax=Pinus sylvestris RepID=B1PYP3_PINSY 3.0e-38
FL-Next: tr=KU80-like protein; Pinus sylvestris (Scots pine). 0.0
Sma3: KAP-2 5.455e-09
N-terminus
sp_v3.0_unigene78454 SustainPine v3.0 174
AutoFact: KAP-2 n=1 Tax=Medicago truncatula RepID=Q8S563_MEDTR 4.0e-17
FL-Next: tr=KU80-like protein; Pinus sylvestris (Scots pine). 0.0
Sma3: KAP-2 3.602e-13
Internal
sp_v3.0_unigene81419 SustainPine v3.0 172
AutoFact: ku P80 DNA helicase, putative; K10885 ATP-dependent DNA helicase 2 subunit 2 4.0e-11
FL-Next: tr=KU80-like protein; Pinus sylvestris (Scots pine). 0.0
Sma3: KAP-2 3.246e-09
Internal
sp_v3.0_unigene101026 SustainPine v3.0 375
AutoFact: Ku70 homolog [Populus nigra] 2.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene102787 SustainPine v3.0 435
AutoFact: KU80-like protein (Fragment) n=1 Tax=Pinus sylvestris RepID=B1PYP3_PINSY 7.0e-31
FL-Next: tr=KU80-like protein; Pinus sylvestris (Scots pine). 0.0
Sma3: KAP-2 6.229e-09
Internal
sp_v3.0_unigene106505 SustainPine v3.0 366
AutoFact: Unassigned protein
FL-Next: tr=KU80-like protein; Pinus sylvestris (Scots pine). 0.0
Sma3: KAP-2 3.108e-13
Internal
sp_v3.0_unigene107150 SustainPine v3.0 243
AutoFact: RecName: Full=ATP-dependent DNA helicase 2 subunit KU80; AltName: Full=ATP-dependent DNA helicase 2 subunit 2; AltName: Full=ATP-dependent DNA helicase II 80 kDa subunit gb|AAS01977.1| putative H-box binding protein, KAP2, with alternative splicing isofor 1.0e-22
FL-Next: tr=KU80-like protein; Pinus sylvestris (Scots pine). 0.0
Sma3: KAP-2 2.427e-13
Internal
sp_v3.0_unigene107272 SustainPine v3.0 255
AutoFact: ATP-dependent DNA helicase 2 subunit KU80 n=1 Tax=Oryza sativa Japonica Group RepID=KU80_ORYSJ 9.0e-08
FL-Next: tr=KU80-like protein; Pinus sylvestris (Scots pine). 0.0
Sma3: KAP-2 1.902e-13
Internal
sp_v3.0_unigene111456 SustainPine v3.0 250
AutoFact: Unassigned protein
FL-Next: tr=KU80-like protein; Pinus sylvestris (Scots pine). 0.0
Sma3: KU80-like protein 1.462e-06
N-terminus
sp_v3.0_unigene164432 SustainPine v3.0 101
AutoFact: Unassigned protein 1.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene165148 SustainPine v3.0 205
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene199377 SustainPine v3.0 536
AutoFact: KU80-like protein (Fragment) n=1 Tax=Pinus sylvestris RepID=B1PYP3_PINSY 0.0
FL-Next: tr=KU80-like protein; Pinus sylvestris (Scots pine). 0.0
Sma3: KAP-2 3.314e-13
Internal
sp_v3.0_unigene199423 SustainPine v3.0 321
AutoFact: Unassigned protein
FL-Next: tr=KU80-like protein; Pinus sylvestris (Scots pine). 0.0
Sma3: KU80-like protein 1.462e-06
N-terminus
sp_v3.0_unigene200659 SustainPine v3.0 470
AutoFact: RecName: Full=ATP-dependent DNA helicase 2 subunit KU80; AltName: Full=ATP-dependent DNA helicase 2 subunit 2; AltName: Full=ATP-dependent DNA helicase II 80 kDa subunit gb|AAS01977.1| putative H-box binding protein, KAP2, with alternative splicing isofor 2.94273e-44
FL-Next: tr=KU80-like protein; Pinus sylvestris (Scots pine). 0.0
Sma3: KAP-2 3.602e-13
Internal
sp_v3.0_unigene208868 SustainPine v3.0 124
AutoFact: Ku P80 DNA helicase, putative n=1 Tax=Ricinus communis RepID=B9RDD3_RICCO 2.0e-09
FL-Next: tr=KU80-like protein; Pinus sylvestris (Scots pine). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain