Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Protein of unknown function DUF295

Term: IPR005174  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene58540 SustainPine v3.0 225
AutoFact: Putative polyprotein n=1 Tax=Solanum lycopersicum RepID=Q5GA69_SOLLC 7.0e-18
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Reverse transcriptase-like protein 2.538e-22
Internal
sp_v3.0_unigene61594 SustainPine v3.0 331
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY10_PICAB 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 6.681e-33
Internal
sp_v3.0_unigene61783 SustainPine v3.0 360
AutoFact: Pol polyprotein n=1 Tax=Boechera divaricarpa RepID=B6REM4_9BRAS 1.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Copia-type polyprotein 6.203e-13
Internal
sp_v3.0_unigene62259 SustainPine v3.0 291
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus coulteri RepID=Q06298_PINCU 2.0e-26
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Reverse transcriptase 1.025e-34
Internal
sp_v3.0_unigene63900 SustainPine v3.0 339
AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q7Y141_ORYSJ 2.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.346e-16
Internal
sp_v3.0_unigene65074 SustainPine v3.0 227
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene66419 SustainPine v3.0 358
AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=1 Tax=Oryza sativa Japonica Group RepID=Q2QP36_ORYSJ 1.0e-24
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.608e-16
Internal
sp_v3.0_unigene67636 SustainPine v3.0 230
AutoFact: RVT_2 domain containing protein 2.0e-08
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Internal
sp_v3.0_unigene68323 SustainPine v3.0 321
AutoFact: RVT_2 domain containing protein 4.0e-25
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Internal
sp_v3.0_unigene68742 SustainPine v3.0 257
AutoFact: Unassigned protein 5.0e-21
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.33e-12
Internal
sp_v3.0_unigene69361 SustainPine v3.0 310
AutoFact: Unassigned protein
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.582e-09
Internal
sp_v3.0_unigene74483 SustainPine v3.0 408
AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA 1.4013e-45
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.671e-14
Putative C-terminus
sp_v3.0_unigene84123 SustainPine v3.0 410
AutoFact: CYSTM domain containing protein 2.0e-13
coding
sp_v3.0_unigene93659 SustainPine v3.0 951
AutoFact: rve domain containing protein 2.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 3.613e-20
Putative N-terminus
sp_v3.0_unigene98669 SustainPine v3.0 406
AutoFact: rve domain containing protein 3.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene102832 SustainPine v3.0 385
AutoFact: Copia LTR rider n=1 Tax=Solanum lycopersicum RepID=B1N668_SOLLC 3.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 6.503e-23
Internal
sp_v3.0_unigene103202 SustainPine v3.0 275
AutoFact: RVT_2 domain containing protein 3.0e-05
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Internal
sp_v3.0_unigene104393 SustainPine v3.0 545
AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.023e-23
Internal
sp_v3.0_unigene105881 SustainPine v3.0 367
AutoFact: rve domain containing protein 2.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.767e-09
Internal
sp_v3.0_unigene106753 SustainPine v3.0 478
AutoFact: rve domain containing protein 5.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Gag-Pol polyprotein 1.308e-06
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain