Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, C2H2-type matrin

Term: IPR000690  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene5629 SustainPine v3.0 2217
• AutoFact: splicing factor 3A subunit 3 [Arabidopsis thaliana] dbj|BAB09681.1| splicing factor 3a [Arabidopsis thaliana] gb|AAK64048.1| putative splicing factor 3a [Arabidopsis thaliana] gb|AAM44910.1| putative splicing factor 3a protein [Arabidopsis thaliana] gb|AE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene8981 SustainPine v3.0 1513
• AutoFact: PREDICTED: similar to putative C-type U1 snRNP n=1 Tax=Vitis vinifera RepID=UPI00019837D4 1.99965e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene9367 SustainPine v3.0 1874
• AutoFact: PREDICTED: similar to putative C-type U1 snRNP n=1 Tax=Vitis vinifera RepID=UPI00019837D4 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene10594 SustainPine v3.0 912
• AutoFact: splicing factor 3A subunit 2 [Arabidopsis thaliana] gb|AAK96629.1| At2g32600/T26B15.16 [Arabidopsis thaliana] gb|AAC25942.2| putative spliceosome associated protein [Arabidopsis thaliana] gb|AAM19966.1| At2g32600/T26B15.16 [Arabidopsis thaliana] gb|AEC087 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Splicing factor 3A subunit 2 6.042e-09
N-terminus
sp_v3.0_unigene20674 SustainPine v3.0 603
• AutoFact: PAT1 multi-domain protein 3.0e-15
coding
sp_v3.0_unigene23497 SustainPine v3.0 1040
• AutoFact: C2H2 and C2HC zinc finger protein [Arabidopsis thaliana] gb|AAQ22665.1| At1g49590 [Arabidopsis thaliana] gb|AEE32445.1| C2H2 and C2HC zinc finger protein [Arabidopsis thaliana] 5.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene45268 SustainPine v3.0 606
• AutoFact: splicing factor 3A subunit 3 [Arabidopsis thaliana] dbj|BAB09681.1| splicing factor 3a [Arabidopsis thaliana] gb|AAK64048.1| putative splicing factor 3a [Arabidopsis thaliana] gb|AAM44910.1| putative splicing factor 3a protein [Arabidopsis thaliana] gb|AE 4.00001e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene52643 SustainPine v3.0 153
• AutoFact: splicing factor 3A subunit 2 [Arabidopsis thaliana] gb|AAK96629.1| At2g32600/T26B15.16 [Arabidopsis thaliana] gb|AAC25942.2| putative spliceosome associated protein [Arabidopsis thaliana] gb|AAM19966.1| At2g32600/T26B15.16 [Arabidopsis thaliana] gb|AEC087 6.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Splicing factor 3A subunit 2 5.743e-09
Internal
sp_v3.0_unigene60696 SustainPine v3.0 371
• AutoFact: PREDICTED: similar to putative C-type U1 snRNP n=1 Tax=Vitis vinifera RepID=UPI00019837D4 7.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene69380 SustainPine v3.0 154
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Splicing factor 3A subunit 2 1.248e-09
Internal
sp_v3.0_unigene71368 SustainPine v3.0 125
• AutoFact: Splicing factor 3A subunit putative n=1 Tax=Albugo laibachii Nc14 RepID=F0WD56_9STRA 3.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Splicing factor 3A subunit 2 3.335e-09
Internal
sp_v3.0_unigene73775 SustainPine v3.0 374
• AutoFact: splicing factor 3a [Coprinopsis cinerea okayama7#130] gb|EAU92722.1| splicing factor 3a [Coprinopsis cinerea okayama7#130] 1.96182e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Splicing factor 3A subunit 2 5.891e-09
N-terminus
sp_v3.0_unigene100389 SustainPine v3.0 717
• AutoFact: Unassigned protein 8.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene151548 SustainPine v3.0 134
• AutoFact: PREDICTED: similar to putative C-type U1 snRNP n=1 Tax=Vitis vinifera RepID=UPI00019837D4 2.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene151809 SustainPine v3.0 490
• AutoFact: Splicing factor 3A putative n=1 Tax=Albugo laibachii Nc14 RepID=F0W4M0_9STRA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene152000 SustainPine v3.0 403
• AutoFact: Splicing factor 3a, putative n=1 Tax=Ricinus communis RepID=B9RII3_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene155415 SustainPine v3.0 553
• AutoFact: U1 small nuclear ribonucleoprotein C n=1 Tax=Salmo salar RepID=B5XBE7_SALSA 5.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene157360 SustainPine v3.0 477
• AutoFact: U1-type zinc finger-containing protein n=1 Tax=Polysphondylium pallidum RepID=D3BSQ9_POLPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Splicing factor 3A subunit 2 5.891e-09
Internal
sp_v3.0_unigene158168 SustainPine v3.0 114
• AutoFact: splicing factor 3A subunit 2 [Arabidopsis thaliana] gb|AAK96629.1| At2g32600/T26B15.16 [Arabidopsis thaliana] gb|AAC25942.2| putative spliceosome associated protein [Arabidopsis thaliana] gb|AAM19966.1| At2g32600/T26B15.16 [Arabidopsis thaliana] gb|AEC087 5.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Splicing factor 3A subunit 2 2.745e-09
Putative N-terminus
sp_v3.0_unigene158242 SustainPine v3.0 419
• AutoFact: SPL2p n=3 Tax=Chlamydomonas reinhardtii RepID=A8HYG6_CHLRE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Splicing factor 3A subunit 2 5.743e-09
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain