Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: DNA topoisomerase, type IA, central region, subdomain 1

Term: IPR013824  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene71660 SustainPine v3.0 307
• AutoFact: DNA topoisomerase n=1 Tax=Sorghum bicolor RepID=C5WWW3_SORBI 3.0e-37
• FL-Next: sp=DNA topoisomerase; Brachypodium distachyon (Purple false brome) (Trachynia distachya). 0.0
Internal
sp_v3.0_unigene72143 SustainPine v3.0 341
• AutoFact: Integrase n=1 Tax=Populus trichocarpa RepID=Q0ZCD0_POPTR 5.0e-31
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
N-terminus
sp_v3.0_unigene74405 SustainPine v3.0 335
• AutoFact: DNA topoisomerase (Fragment) n=1 Tax=Vitis vinifera RepID=D7U9K8_VITVI 1.0e-37
• FL-Next: sp=DNA topoisomerase; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene80151 SustainPine v3.0 206
• AutoFact: DNA topoisomerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U3N3_PHYPA 6.0e-23
• FL-Next: sp=DNA topoisomerase; Glycine max (Soybean) (Glycine hispida). 0.0
• Sma3: Putative DNA topoisomerase III beta 1.635e-08
Internal
sp_v3.0_unigene103054 SustainPine v3.0 449
• AutoFact: DNA topoisomerase n=1 Tax=Ricinus communis RepID=B9RRL8_RICCO 3.0e-28
• FL-Next: sp=DNA topoisomerase; Ricinus communis (Castor bean). 0.0
• Sma3: Putative DNA topoisomerase III beta 7.196e-09
C-terminus
sp_v3.0_unigene129382 SustainPine v3.0 291
• AutoFact: DNA topoisomerase n=1 Tax=Populus trichocarpa RepID=B9H4K8_POPTR 6.0e-07
• FL-Next: sp=DNA topoisomerase; subsp. trichocarpa). 0.0
C-terminus
sp_v3.0_unigene137627 SustainPine v3.0 167
unknown
sp_v3.0_unigene160034 SustainPine v3.0 432
• AutoFact: DNA topoisomerase n=5 Tax=Poaceae RepID=Q0J0S6_ORYSJ 0.0
• FL-Next: sp=DNA topoisomerase; Vitis vinifera (Grape). 0.0
• Sma3: Putative DNA topoisomerase III beta 1.251e-08
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain