Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Extracellular ligand-binding receptor

Term: IPR001828  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene62019 SustainPine v3.0 239
AutoFact: Glutamate receptor (Fragment) n=2 Tax=Vitis vinifera RepID=D7UDC6_VITVI 4.0e-12
FL-Next: sp=Glutamate receptor 3.3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 7.946e-08
Internal
sp_v3.0_unigene64431 SustainPine v3.0 255
AutoFact: Glutamate receptor n=1 Tax=Ricinus communis RepID=B9SDW0_RICCO 2.0e-12
FL-Next: sp=Glutamate receptor 3.3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative N-terminus
sp_v3.0_unigene66478 SustainPine v3.0 387
AutoFact: Copia-type polyprotein n=1 Tax=Glycine max RepID=C0JJI2_SOYBN 1.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, unclassified 1.105e-11
N-terminus
sp_v3.0_unigene68744 SustainPine v3.0 241
AutoFact: Glutamate receptor (Fragment) n=2 Tax=Vitis vinifera RepID=D7UDC6_VITVI 2.0e-09
FL-Next: sp=Glutamate receptor 3.1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene72854 SustainPine v3.0 285
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 8.0e-22
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.4013e-45
Internal
sp_v3.0_unigene74723 SustainPine v3.0 180
AutoFact: Glutamate receptor n=1 Tax=Sorghum bicolor RepID=C5Z856_SORBI 3.0e-12
FL-Next: sp=Glutamate receptor 3.7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glutamate receptor 3 plant, putative 3.073e-08
Internal
sp_v3.0_unigene75882 SustainPine v3.0 341
AutoFact: putative glutamate receptor like-protein [Arabidopsis thaliana] gb|AAK13249.1|AF159499_1 putative glutamate receptor like-protein [Arabidopsis thaliana] 2.0e-18
FL-Next: sp=Glutamate receptor 3.2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 0.0
Internal
sp_v3.0_unigene76178 SustainPine v3.0 121
AutoFact: Glutamate receptor 3.2 n=2 Tax=Arabidopsis RepID=GLR32_ARATH 2.0e-11
FL-Next: sp=Glutamate receptor 3.2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glutamate receptor 3 plant, putative 5.713e-14
Internal
sp_v3.0_unigene76671 SustainPine v3.0 357
AutoFact: Glutamate receptor n=1 Tax=Nicotiana tabacum RepID=Q84QE2_TOBAC 2.0e-22
FL-Next: sp=Glutamate receptor 2.9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 0.0
Internal
sp_v3.0_unigene77700 SustainPine v3.0 334
AutoFact: Glutamate receptor 3.3 n=3 Tax=Arabidopsis RepID=GLR33_ARATH 5.0e-23
FL-Next: sp=Glutamate receptor 3.3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene78999 SustainPine v3.0 364
AutoFact: Glutamate receptor n=1 Tax=Raphanus sativus var. sativus RepID=Q7XAV6_RAPSA 7.0e-31
FL-Next: sp=Glutamate receptor 3.2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 0.0
Internal
sp_v3.0_unigene79091 SustainPine v3.0 152
AutoFact: RecName: Full=Glutamate receptor 2.5; AltName: Full=Ligand-gated ion channel 2.5; Flags: Precursor 2.0e-08
FL-Next: sp=Glutamate receptor 2.5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene79415 SustainPine v3.0 287
AutoFact: Glutamate receptor n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S8F0_PHYPA 9.0e-23
FL-Next: sp=Glutamate receptor 3.4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 1.02e-14
Internal
sp_v3.0_unigene81137 SustainPine v3.0 282
AutoFact: Glutamate receptor n=1 Tax=Malus hupehensis RepID=A4GU97_9ROSA 4.0e-23
FL-Next: sp=Glutamate receptor 3.2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 4.933e-06
Internal
sp_v3.0_unigene94167 SustainPine v3.0 690
AutoFact: Glutamate receptor (Fragment) n=2 Tax=Vitis vinifera RepID=D7UDC6_VITVI 0.0
FL-Next: sp=Glutamate receptor 3.3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 9.07201e-42
Internal
sp_v3.0_unigene95907 SustainPine v3.0 673
AutoFact: Glutamate receptor n=1 Tax=Vitis vinifera RepID=A5AIS1_VITVI 0.0
FL-Next: sp=Glutamate receptor 2.6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chromosome undetermined scaffold_107, whole genome shotgun sequence 1.48e-26
Internal
sp_v3.0_unigene96768 SustainPine v3.0 482
AutoFact: Glutamate receptor n=1 Tax=Populus trichocarpa RepID=B9GU66_POPTR 0.0
FL-Next: sp=Glutamate receptor 3.1; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 0.0
Internal
sp_v3.0_unigene96982 SustainPine v3.0 361
AutoFact: glutamate receptor, ionotropic kainate 5 precursor-like protein [Oryza sativa Japonica Group] 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutamate receptor 3 plant, putative 2.045e-07
Putative N-terminus
sp_v3.0_unigene97462 SustainPine v3.0 327
AutoFact: Glutamate receptor n=1 Tax=Populus trichocarpa RepID=B9IAE8_POPTR 3.0e-17
FL-Next: sp=Glutamate receptor 3.5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Ligand gated channel-like protein 7.31e-06
Internal
sp_v3.0_unigene98801 SustainPine v3.0 316
AutoFact: Glutamate receptor 3.2 n=2 Tax=Arabidopsis RepID=GLR32_ARATH 1.0e-23
FL-Next: sp=Glutamate receptor 3.2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 4.955e-17
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain