Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: S-adenosyl-l-methionine decarboxylase leader peptide

Term: IPR012511  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene4610 SustainPine v3.0 674
• AutoFact: S-adenosylmethionine decarboxylase proenzyme n=2 Tax=Picea sitchensis RepID=B8LQ15_PICSI 0.0
• FL-Next: sp=S-adenosylmethionine decarboxylase proenzyme; Pinus sylvestris (Scots pine). 0.0
• Sma3: S-adenosylmethionine decarboxylase 0.0
N-terminus
sp_v3.0_unigene11132 SustainPine v3.0 2268
• AutoFact: S-adenosylmethionine decarboxylase proenzyme n=2 Tax=Picea sitchensis RepID=B8LQ15_PICSI 0.0
• FL-Next: sp=S-adenosylmethionine decarboxylase proenzyme; Pinus sylvestris (Scots pine). 0.0
• Sma3: S-adenosylmethionine decarboxylase 0.0
Complete
sp_v3.0_unigene34061 SustainPine v3.0 1839
• AutoFact: S-adenosylmethionine decarboxylase proenzyme n=2 Tax=Picea sitchensis RepID=B8LQ15_PICSI 0.0
• FL-Next: sp=S-adenosylmethionine decarboxylase proenzyme; Pinus sylvestris (Scots pine). 0.0
• Sma3: S-adenosylmethionine decarboxylase 0.0
Complete
sp_v3.0_unigene35429 SustainPine v3.0 841
• AutoFact: S-adenosylmethionine decarboxylase proenzyme n=2 Tax=Picea sitchensis RepID=B8LQ15_PICSI 0.0
• FL-Next: sp=S-adenosylmethionine decarboxylase proenzyme; Pinus sylvestris (Scots pine). 0.0
• Sma3: S-adenosylmethionine decarboxylase 0.0
C-terminus
sp_v3.0_unigene51944 SustainPine v3.0 212
• AutoFact: Putative polyprotein n=2 Tax=Oryza sativa Japonica Group RepID=Q851Y3_ORYSJ 2.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.393e-08
Putative N-terminus
sp_v3.0_unigene53182 SustainPine v3.0 216
• AutoFact: S-adenosylmethionine decarboxylase (Fragment) n=1 Tax=Prunus persica RepID=Q6KC47_PRUPE 4.0e-08
• FL-Next: tr=Uncharacterized protein; Brachypodium distachyon (Purple false brome) (Trachynia distachya). 0.0
• Sma3: S-adenosylmethionine decarboxylase uORF 6.626e-10
C-terminus
sp_v3.0_unigene60679 SustainPine v3.0 233
• AutoFact: S-adenosylmethionine decarboxylase proenzyme n=3 Tax=Vitis vinifera RepID=Q7XZQ9_VITVI 7.0e-16
• FL-Next: sp=S-adenosylmethionine decarboxylase proenzyme; Pinus sylvestris (Scots pine). 0.0
• Sma3: S-adenosylmethionine decarboxylase 3.774e-33
Internal
sp_v3.0_unigene61515 SustainPine v3.0 232
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY11_PICAB 2.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.677e-31
Internal
sp_v3.0_unigene61698 SustainPine v3.0 268
• AutoFact: S-adenosylmethionine decarboxylase proenzyme n=2 Tax=Picea sitchensis RepID=B8LQ15_PICSI 7.0e-32
• FL-Next: sp=S-adenosylmethionine decarboxylase proenzyme; Pinus sylvestris (Scots pine). 0.0
• Sma3: S-adenosylmethionine decarboxylase 0.0
Internal
sp_v3.0_unigene62294 SustainPine v3.0 153
• AutoFact: Adenosylmethionine decarboxylase family protein n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7LQR4_ARALL 3.0e-12
• FL-Next: sp=S-adenosylmethionine decarboxylase proenzyme; Pinus sylvestris (Scots pine). 0.0
• Sma3: S-adenosylmethionine decarboxylase 0.0
Internal
sp_v3.0_unigene70751 SustainPine v3.0 421
• AutoFact: S-adenosylmethionine decarboxylase proenzyme n=5 Tax=Pooideae RepID=D4P703_LEYCH 0.0
• FL-Next: sp=S-adenosylmethionine decarboxylase proenzyme; Hordeum chilense (Barley) (Critesion chilense). 0.0
• Sma3: S-adenosylmethionine decarboxylase proenzyme 3.43e-17
C-terminus
sp_v3.0_unigene71666 SustainPine v3.0 290
• AutoFact: S-adenosylmethionine decarboxylase proenzyme n=2 Tax=Picea sitchensis RepID=B8LQ15_PICSI 1.0e-15
• FL-Next: sp=S-adenosylmethionine decarboxylase proenzyme; Pinus sylvestris (Scots pine). 0.0
• Sma3: S-adenosylmethionine decarboxylase 3.855e-21
Internal
sp_v3.0_unigene73494 SustainPine v3.0 126
• AutoFact: S-adenosylmethionine decarboxylase proenzyme n=2 Tax=Picea sitchensis RepID=B8LQ15_PICSI 4.0e-09
• FL-Next: sp=S-adenosylmethionine decarboxylase proenzyme; Pinus sylvestris (Scots pine). 0.0
• Sma3: S-adenosylmethionine decarboxylase 7.544e-37
Internal
sp_v3.0_unigene76061 SustainPine v3.0 364
• AutoFact: S-adenosylmethionine decarboxylase proenzyme n=2 Tax=Picea sitchensis RepID=B8LQ15_PICSI 4.00001e-40
• FL-Next: sp=S-adenosylmethionine decarboxylase proenzyme; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: S-adenosylmethionine decarboxylase 0.0
Internal
sp_v3.0_unigene78108 SustainPine v3.0 303
• AutoFact: S-adenosylmethionine decarboxylase proenzyme n=2 Tax=Picea sitchensis RepID=B8LQ15_PICSI 1.0e-23
• FL-Next: sp=S-adenosylmethionine decarboxylase proenzyme; Pinus sylvestris (Scots pine). 0.0
• Sma3: S-adenosylmethionine decarboxylase 0.0
Misassembled
sp_v3.0_unigene78670 SustainPine v3.0 139
• AutoFact: S-adenosylmethionine decarboxylase proenzyme n=2 Tax=Picea sitchensis RepID=B8LQ15_PICSI 2.0e-07
• FL-Next: sp=S-adenosylmethionine decarboxylase proenzyme; Pinus sylvestris (Scots pine). 0.0
• Sma3: S-adenosylmethionine decarboxylase proenzyme 4.732e-13
Internal
sp_v3.0_unigene126556 SustainPine v3.0 883
• AutoFact: S-adenosylmethionine decarboxylase proenzyme n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T961_PHYPA 0.0
• FL-Next: sp=S-adenosylmethionine decarboxylase proenzyme; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: S-adenosylmethionine decarboxylase 0.0
C-terminus
sp_v3.0_unigene127009 SustainPine v3.0 1170
• AutoFact: S-adenosylmethionine decarboxylase proenzyme n=2 Tax=Picea sitchensis RepID=B8LQ15_PICSI 0.0
• FL-Next: sp=S-adenosylmethionine decarboxylase proenzyme; Pinus sylvestris (Scots pine). 0.0
• Sma3: S-adenosylmethionine decarboxylase 0.0
Misassembled
sp_v3.0_unigene139733 SustainPine v3.0 434
• AutoFact: S-adenosylmethionine decarboxylase leader [Narcissus pseudonarcissus] 2.0e-13
• FL-Next: tr=Putative uncharacterized protein Sb02g025120; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
• Sma3: S-adenosylmethionine decarboxylase uORF 2.522e-09
Complete
sp_v3.0_unigene146552 SustainPine v3.0 556
• AutoFact: S-adenosylmethionine decarboxylase proenzyme n=2 Tax=Picea sitchensis RepID=B8LQ15_PICSI 0.0
• FL-Next: sp=S-adenosylmethionine decarboxylase proenzyme; Daucus carota (Carrot). 0.0
• Sma3: S-adenosylmethionine decarboxylase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain