Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Spen paralogue and orthologue SPOC, C-terminal

Term: IPR012921  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene4389 SustainPine v3.0 732
• AutoFact: nucleic acid binding protein [Arabidopsis thaliana] gb|AAM13844.1| unknown protein [Arabidopsis thaliana] gb|AEE30872.1| nucleic acid binding protein [Arabidopsis thaliana] 2.0e-38
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
N-terminus
sp_v3.0_unigene7375 SustainPine v3.0 1965
• AutoFact: RNA recognition motif-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SU08_RICCO 1.99993e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein AT4g12640 5.848e-06
C-terminus
sp_v3.0_unigene12430 SustainPine v3.0 1001
• AutoFact: nucleic acid binding protein [Arabidopsis thaliana] gb|AAM13844.1| unknown protein [Arabidopsis thaliana] gb|AEE30872.1| nucleic acid binding protein [Arabidopsis thaliana] 9.99995e-41
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
C-terminus
sp_v3.0_unigene14099 SustainPine v3.0 3945
• AutoFact: [K] COG1594 DNA-directed RNA polymerase, subunit M/Transcription elongation factor TFIIS 2.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene14371 SustainPine v3.0 613
• AutoFact: Ubiquitin system component Cue protein [Arabidopsis thaliana] gb|AEE30873.1| Ubiquitin system component Cue protein [Arabidopsis thaliana] 1.0e-28
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene16115 SustainPine v3.0 659
• AutoFact: Ubiquitin system component Cue protein n=1 Tax=Arabidopsis thaliana RepID=B3H6L4_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Internal
sp_v3.0_unigene16714 SustainPine v3.0 806
• AutoFact: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2 [Arabidopsis thaliana] sp|Q67ZE1.2|HSDD2_ARATH RecName: Full=3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2; Short=At3BETAHSD/D2; AltName: Full=4alpha-carboxysterol-C3-dehydrogenase/C4 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 3-beta-hydroxysteroid dehydrogenase 7.95e-12
Internal
sp_v3.0_unigene22778 SustainPine v3.0 1553
• AutoFact: RNA recognition motif-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SU08_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene24777 SustainPine v3.0 3974
• AutoFact: RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] gb|AEE83159.1| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene61443 SustainPine v3.0 325
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene68967 SustainPine v3.0 246
• AutoFact: nucleic acid binding protein [Arabidopsis thaliana] gb|AAM13844.1| unknown protein [Arabidopsis thaliana] gb|AEE30872.1| nucleic acid binding protein [Arabidopsis thaliana] 3.0e-16
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene69101 SustainPine v3.0 129
• AutoFact: Unassigned protein 2.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene94887 SustainPine v3.0 445
• AutoFact: SPOC domain containing protein 2.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: FPA 1.539e-09
Internal
sp_v3.0_unigene97783 SustainPine v3.0 143
• AutoFact: Unassigned protein 3.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene104868 SustainPine v3.0 358
• AutoFact: Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating n=1 Tax=Zea mays RepID=B6TKP9_MAIZE 5.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative 3-beta hydroxysteroid dehydrogenase/isomerase 5.344e-12
Putative N-terminus
sp_v3.0_unigene122238 SustainPine v3.0 320
• AutoFact: nucleic acid binding protein [Arabidopsis thaliana] gb|AAM13844.1| unknown protein [Arabidopsis thaliana] gb|AEE30872.1| nucleic acid binding protein [Arabidopsis thaliana] 8.0e-12
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene134064 SustainPine v3.0 347
• AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 4.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene136600 SustainPine v3.0 237
• AutoFact: nucleic acid binding protein [Arabidopsis thaliana] gb|AAM13844.1| unknown protein [Arabidopsis thaliana] gb|AEE30872.1| nucleic acid binding protein [Arabidopsis thaliana] 6.0e-15
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene200607 SustainPine v3.0 142
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain