Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Tudor domain

Term: IPR002999  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene3616 SustainPine v3.0 3663
AutoFact: DNA mismatch repair protein [Petunia x hybrida] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MutS homolog 7 1.575e-08
Putative Complete
sp_v3.0_unigene8276 SustainPine v3.0 1614
AutoFact: survival of motor neuron-related-splicing factor 30 [Arabidopsis thaliana] ref|NP_849927.1| survival of motor neuron-related-splicing factor 30 [Arabidopsis thaliana] ref|NP_001077871.1| survival of motor neuron-related-splicing factor 30 [Arabidopsis tha 0.0
FL-Next: tr=Uncharacterized protein; Lotus japonicus (Lotus corniculatus var. japonicus). 0.0
Sma3: Survival motor neuron protein, putative 1.05e-09
Complete
sp_v3.0_unigene10278 SustainPine v3.0 3906
AutoFact: DNA mismatch repair protein MSH6-2, putative n=1 Tax=Ricinus communis RepID=B9RKT8_RICCO 0.0
FL-Next: sp=DNA mismatch repair protein MSH7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: MutS homolog 7 2.217e-08
Putative Complete
sp_v3.0_unigene36836 SustainPine v3.0 215
AutoFact: TUDOR protein with multiple SNc domains n=2 Tax=Picea RepID=Q0JRI3_PICAB 2.0e-24
FL-Next: tr=TUDOR protein with multiple SNc domains; Picea abies (Norway spruce) (Picea excelsa). 0.0
Internal
sp_v3.0_unigene59542 SustainPine v3.0 266
AutoFact: DNA mismatch repair protein Msh6-1 n=3 Tax=Arabidopsis RepID=MSH6_ARATH 2.0e-32
FL-Next: sp=DNA mismatch repair protein MSH6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene62823 SustainPine v3.0 212
AutoFact: Mismatch repair protein (Fragment) n=1 Tax=Solanum lycopersicum RepID=D6QY21_SOLLC 3.0e-26
FL-Next: sp=DNA mismatch repair protein MSH7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: MutS homolog 7 1.374e-08
Internal
sp_v3.0_unigene64754 SustainPine v3.0 170
AutoFact: putative mismatch binding protein Mus3 [Oryza sativa Japonica Group] dbj|BAD36299.1| putative mismatch binding protein Mus3 [Oryza sativa Japonica Group] 4.0e-26
FL-Next: sp=DNA mismatch repair protein MSH6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene101617 SustainPine v3.0 893
AutoFact: survival of motor neuron-related-splicing factor 30 [Arabidopsis thaliana] ref|NP_849927.1| survival of motor neuron-related-splicing factor 30 [Arabidopsis thaliana] ref|NP_001077871.1| survival of motor neuron-related-splicing factor 30 [Arabidopsis tha 0.0
FL-Next: tr=Uncharacterized protein; Lotus japonicus (Lotus corniculatus var. japonicus). 0.0
Sma3: Putative uncharacterized protein At2g02570 9.88e-10
Putative N-terminus
sp_v3.0_unigene159400 SustainPine v3.0 474
AutoFact: PREDICTED: DNA mismatch repair protein Msh6-like n=1 Tax=Anolis carolinensis RepID=UPI000203838B 0.0
FL-Next: sp=DNA mismatch repair protein MSH7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: MutS homolog 7 5.347e-08
Internal
sp_v3.0_unigene166253 SustainPine v3.0 284
AutoFact: MutS homolog 7 [Triticum aestivum] 1.0e-33
FL-Next: sp=DNA mismatch repair protein MSH7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: MutS homolog 7 2.626e-08
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain