Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ribosomal protein L1, 3-layer alpha/beta-sandwich

Term: IPR016095  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene158711 SustainPine v3.0 330
• AutoFact: Ribosomal protein n=1 Tax=Zea mays RepID=B4FN28_MAIZE 6.0e-28
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 1.288e-34
N-terminus
sp_v3.0_unigene158718 SustainPine v3.0 445
• AutoFact: Ribosomal protein n=1 Tax=Trypanosoma cruzi RepID=E7LJ50_TRYCR 6.0e-40
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 1.159e-35
C-terminus
sp_v3.0_unigene158976 SustainPine v3.0 407
• AutoFact: Ribosomal protein n=11 Tax=Euteleostei RepID=A9Z0M8_ONCMA 1.0e-24
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 5.829e-19
C-terminus
sp_v3.0_unigene158996 SustainPine v3.0 545
• AutoFact: 60S ribosomal protein L10A n=3 Tax=Neoptera RepID=D1FPL3_CIMLE 0.0
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 7.918e-38
C-terminus
sp_v3.0_unigene161283 SustainPine v3.0 405
• AutoFact: 60S ribosomal protein L1, putative n=1 Tax=Theileria parva RepID=Q4N362_THEPA 5.0e-26
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 2.129e-29
N-terminus
sp_v3.0_unigene162191 SustainPine v3.0 369
• AutoFact: Ribosomal protein n=6 Tax=Agaricomycetes RepID=B0DAX3_LACBS 5.0e-35
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 1.442e-31
N-terminus
sp_v3.0_unigene186133 SustainPine v3.0 856
• AutoFact: Ribosomal protein n=13 Tax=Poaceae RepID=B7F845_ORYSJ 0.0
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 2.274e-37
Complete
sp_v3.0_unigene186297 SustainPine v3.0 436
• AutoFact: Ribosomal protein n=2 Tax=Ixodes scapularis RepID=B7P3X5_IXOSC 3.9937e-43
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 2.512e-38
C-terminus
sp_v3.0_unigene186578 SustainPine v3.0 476
• AutoFact: Ribosomal protein n=1 Tax=Fenneropenaeus merguiensis RepID=C7SQT0_FENME 1.99993e-41
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 7.918e-38
C-terminus
sp_v3.0_unigene188648 SustainPine v3.0 866
• AutoFact: PREDICTED: similar to ribosomal protein L10Ae [Tribolium castaneum] gb|EFA01731.1| hypothetical protein TcasGA2_TC007324 [Tribolium castaneum] 0.0
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 9.132e-38
Complete
sp_v3.0_unigene188740 SustainPine v3.0 554
• AutoFact: 60S ribosomal protein L10A n=1 Tax=Ectocarpus siliculosus RepID=D8LNU8_ECTSI 0.0
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 7.918e-38
C-terminus
sp_v3.0_unigene188938 SustainPine v3.0 484
• AutoFact: 60S ribosomal protein L10A n=3 Tax=Neoptera RepID=D1FPL3_CIMLE 8.0e-35
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 9.837e-36
C-terminus
sp_v3.0_unigene192823 SustainPine v3.0 468
• AutoFact: Ribosomal protein n=1 Tax=Daphnia pulex RepID=E9GI92_DAPPU 8.0e-33
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 4.077e-33
C-terminus
sp_v3.0_unigene193266 SustainPine v3.0 470
• AutoFact: putative endomembrane protein 70 [Arabidopsis thaliana] gb|AAK96649.1| T5E21.14/T5E21.14 [Arabidopsis thaliana] gb|AAM16222.1| At1g14670/T5E21.14 [Arabidopsis thaliana] gb|AEE29200.1| putative endomembrane protein 70 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Transmembrane 9 superfamily protein member 1 2.154e-11
Internal
sp_v3.0_unigene199651 SustainPine v3.0 319
• AutoFact: 60S ribosomal protein L10a-3 n=9 Tax=rosids RepID=R10A3_ARATH 1.0e-21
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 8.052e-33
C-terminus
sp_v3.0_unigene203593 SustainPine v3.0 605
• AutoFact: Ribosomal protein n=2 Tax=Poaceae RepID=C4J929_MAIZE 0.0
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 1.904e-37
N-terminus
sp_v3.0_unigene204610 SustainPine v3.0 275
• AutoFact: 60S ribosomal protein L10a-3 n=9 Tax=rosids RepID=R10A3_ARATH 2.0e-17
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 6.448e-33
C-terminus
sp_v3.0_unigene205676 SustainPine v3.0 314
• AutoFact: Ribosomal protein n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5KAV4_9ALVE 7.0e-23
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 1.108e-29
N-terminus
sp_v3.0_unigene209196 SustainPine v3.0 811
• AutoFact: EMP70 multi-domain protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Endomembrane protein 70 containing protein, expressed 8.518e-12
Internal
sp_v3.0_unigene209296 SustainPine v3.0 280
• AutoFact: Ribosomal protein n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9CFH4_9EUKA 2.0e-22
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 1.451e-32
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain