Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ribosomal protein L1, 3-layer alpha/beta-sandwich

Term: IPR016095  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene3526 SustainPine v3.0 2395
AutoFact: putative endomembrane protein 70 [Arabidopsis thaliana] gb|AAK96649.1| T5E21.14/T5E21.14 [Arabidopsis thaliana] gb|AAM16222.1| At1g14670/T5E21.14 [Arabidopsis thaliana] gb|AEE29200.1| putative endomembrane protein 70 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Transmembrane 9 superfamily protein member 1 1.744e-11
Complete
sp_v3.0_unigene14723 SustainPine v3.0 1368
AutoFact: ribosomal protein L1p/L10e family protein [Arabidopsis thaliana] emb|CAB88283.1| putative protein [Arabidopsis thaliana] gb|AAL49900.1| unknown protein [Arabidopsis thaliana] gb|AEE79812.1| ribosomal protein L1p/L10e family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene17792 SustainPine v3.0 1978
AutoFact: 50S ribosomal protein L1 n=1 Tax=Zea mays RepID=B6TB66_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 50S ribosomal protein L1, chloroplastic 1.092e-27
Complete
sp_v3.0_unigene24617 SustainPine v3.0 460
AutoFact: large subunit ribosomal protein 1 [Pristionchus sp. 13 RS5231] 6.0e-38
FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L1 8.202e-32
N-terminus
sp_v3.0_unigene24628 SustainPine v3.0 669
AutoFact: large subunit ribosomal protein 1 [Pristionchus americanus] 0.0
FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L1 5.643e-38
N-terminus
sp_v3.0_unigene25453 SustainPine v3.0 3616
AutoFact: putative endomembrane protein 70 [Arabidopsis thaliana] gb|AAK96649.1| T5E21.14/T5E21.14 [Arabidopsis thaliana] gb|AAM16222.1| At1g14670/T5E21.14 [Arabidopsis thaliana] gb|AEE29200.1| putative endomembrane protein 70 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: OEE2 7.252e-40
Complete
sp_v3.0_unigene26518 SustainPine v3.0 237
AutoFact: Ribosomal protein n=1 Tax=Taenia asiatica RepID=A3F4S3_TAEAS 3.0e-16
FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L1 1.624e-22
C-terminus
sp_v3.0_unigene28405 SustainPine v3.0 330
AutoFact: Ribosomal protein n=1 Tax=Caenorhabditis elegans RepID=Q95Y46_CAEEL 4.0e-24
FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L1 1.108e-29
C-terminus
sp_v3.0_unigene31512 SustainPine v3.0 544
AutoFact: 60S ribosomal protein L10A n=1 Tax=Ectocarpus siliculosus RepID=D8LNU8_ECTSI 0.0
FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L1 7.194e-38
Putative N-terminus
sp_v3.0_unigene31846 SustainPine v3.0 491
AutoFact: ribosomal protein L10Ae [Scarabaeus laticollis] 5.0e-34
FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L1 7.115e-35
N-terminus
sp_v3.0_unigene32176 SustainPine v3.0 535
AutoFact: Ribosomal protein n=1 Tax=Taenia asiatica RepID=A3F4S3_TAEAS 3.00004e-41
FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L1 9.308e-36
C-terminus
sp_v3.0_unigene32251 SustainPine v3.0 754
AutoFact: 60S ribosomal protein L10a n=2 Tax=Salpingoeca sp. ATCC 50818 RepID=F2U9Z3_9EUKA 0.0
FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L1 2.081e-37
Complete
sp_v3.0_unigene68483 SustainPine v3.0 373
AutoFact: 50S ribosomal protein L1 [Arabidopsis thaliana] sp|Q9LY66.1|RK1_ARATH RecName: Full=50S ribosomal protein L1, chloroplastic; AltName: Full=CL1; Flags: Precursor emb|CAB87802.1| chloroplast ribosomal L1-like protein [Arabidopsis thaliana] gb|AAK96640.1| AT 7.00649e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 50S ribosomal protein L1, chloroplastic 3.92364e-44
C-terminus
sp_v3.0_unigene72041 SustainPine v3.0 323
AutoFact: 60S ribosomal protein L10a n=41 Tax=Euteleostomi RepID=RL10A_HUMAN 2.0e-38
FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L1 4.118e-16
Putative N-terminus
sp_v3.0_unigene74408 SustainPine v3.0 261
AutoFact: PREDICTED: similar to L10a n=1 Tax=Hydra magnipapillata RepID=UPI0001927716 4.0e-19
FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L1 2.573e-36
C-terminus
sp_v3.0_unigene74900 SustainPine v3.0 333
AutoFact: Ribosomal protein n=3 Tax=Chromadorea RepID=A8NG31_BRUMA 1.0e-23
FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L1 6.55e-32
Putative N-terminus
sp_v3.0_unigene75058 SustainPine v3.0 266
AutoFact: 60s ribosomal protein L10A n=1 Tax=Glossina morsitans morsitans RepID=D3TMC2_GLOMM 4.0e-29
FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L1 1.605e-34
Internal
sp_v3.0_unigene77025 SustainPine v3.0 201
AutoFact: Chain A, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome pdb|3IZR|A Chain A, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Tra 4.0e-16
FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L1 5.82e-30
Internal
sp_v3.0_unigene77291 SustainPine v3.0 312
AutoFact: 50S ribosomal protein L1 n=1 Tax=Zea mays RepID=B6TB66_MAIZE 6.0e-16
FL-Next: sp=Ribosomal protein; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
C-terminus
sp_v3.0_unigene78565 SustainPine v3.0 251
AutoFact: Ribosomal protein n=1 Tax=Picea sitchensis RepID=A9P244_PICSI 5.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 50S ribosomal protein L1, chloroplastic 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain