Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ERCC4 domain

Term: IPR006166  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene3483 SustainPine v3.0 1023
AutoFact: Endonuclease n=1 Tax=Cucumis melo subsp. melo RepID=E5GCK8_CUCME 0.0
FL-Next: sp=Crossover junction endonuclease MUS81; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative N-terminus
sp_v3.0_unigene5462 SustainPine v3.0 1439
AutoFact: peptidyl-prolyl cis-trans isomerase [Arabidopsis thaliana] gb|AAL08294.1| AT4g17070/dl4565c [Arabidopsis thaliana] gb|AAN28830.1| At4g17070/dl4565c [Arabidopsis thaliana] gb|AEE83845.1| peptidyl-prolyl cis-trans isomerase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Complete
sp_v3.0_unigene6990 SustainPine v3.0 865
AutoFact: DNA repair endonuclease UVH1 [Arabidopsis thaliana] sp|Q9LKI5.2|XPF_ARATH RecName: Full=DNA repair endonuclease UVH1; AltName: Full=DNA excision repair protein XP-F homolog; AltName: Full=Ultraviolet hypersensitive 1; Short=AtRAD1 gb|AAF01274.1|AF160500_1 0.0
FL-Next: sp=DNA repair endonuclease UVH1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Ultraviolet hypersensitive 1 7.78e-09
C-terminus
sp_v3.0_unigene29173 SustainPine v3.0 732
AutoFact: ultraviolet hypersensitive 1 [Arabidopsis thaliana] 0.0
FL-Next: Isoform 2 of DNA repair endonuclease UVH1 OS=Arabidopsis thaliana GN=UVH1 0.0
Sma3: Ultraviolet hypersensitive 1 2.783e-09
N-terminus
sp_v3.0_unigene38987 SustainPine v3.0 521
AutoFact: essential meiotic endonuclease 1A [Arabidopsis thaliana] gb|AAP21264.1| At2g21800 [Arabidopsis thaliana] dbj|BAE99972.1| hypothetical protein [Arabidopsis thaliana] gb|AEC07223.1| essential meiotic endonuclease 1A [Arabidopsis thaliana] 8.00141e-43
FL-Next: sp=Crossover junction endonuclease EME1; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene39508 SustainPine v3.0 1708
AutoFact: endonuclease [Arabidopsis thaliana] 0.0
FL-Next: sp=Crossover junction endonuclease MUS81; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene40817 SustainPine v3.0 273
AutoFact: essential meiotic endonuclease 1A [Arabidopsis thaliana] gb|AAP21264.1| At2g21800 [Arabidopsis thaliana] dbj|BAE99972.1| hypothetical protein [Arabidopsis thaliana] gb|AEC07223.1| essential meiotic endonuclease 1A [Arabidopsis thaliana] 4.0e-19
FL-Next: sp=Crossover junction endonuclease EME1; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Putative uncharacterized protein At2g21800 4.916e-10
Putative C-terminus
sp_v3.0_unigene51359 SustainPine v3.0 301
AutoFact: 5' repair endonuclease [Arabidopsis thaliana] 1.0e-28
FL-Next: Isoform 3 of DNA repair endonuclease UVH1 OS=Arabidopsis thaliana GN=UVH1 0.0
Sma3: Ultraviolet hypersensitive 1 2.608e-09
Internal
sp_v3.0_unigene68692 SustainPine v3.0 163
AutoFact: rad1; RAD1 DNA repair protein homolog; K10848 DNA excision repair protein ERCC-4 [EC:3.1.-.-] 5.0e-15
FL-Next: sp=DNA repair endonuclease UVH1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Ultraviolet hypersensitive 1 3.849e-09
Internal
sp_v3.0_unigene71361 SustainPine v3.0 280
AutoFact: [L] COG1948 ERCC4-type nuclease 9.0e-09
FL-Next: sp=DNA repair endonuclease UVH1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Ultraviolet hypersensitive 1 5.087e-09
Internal
sp_v3.0_unigene73046 SustainPine v3.0 276
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Sma3: Ultraviolet hypersensitive 1 3.151e-09
C-terminus
sp_v3.0_unigene96223 SustainPine v3.0 240
AutoFact: Ultraviolet hypersensitive 1 n=1 Tax=Arabidopsis thaliana RepID=A5JEM6_ARATH 5.0e-18
FL-Next: Isoform 2 of DNA repair endonuclease UVH1 OS=Arabidopsis thaliana GN=UVH1 0.0
Sma3: Ultraviolet hypersensitive 1 8.978e-10
Internal
sp_v3.0_unigene105224 SustainPine v3.0 144
AutoFact: 5' repair endonuclease [Arabidopsis thaliana] 1.0e-08
FL-Next: Isoform 3 of DNA repair endonuclease UVH1 OS=Arabidopsis thaliana GN=UVH1 0.0
Internal
sp_v3.0_unigene108941 SustainPine v3.0 247
AutoFact: essential meiotic endonuclease 1A [Arabidopsis thaliana] gb|AAP21264.1| At2g21800 [Arabidopsis thaliana] dbj|BAE99972.1| hypothetical protein [Arabidopsis thaliana] gb|AEC07223.1| essential meiotic endonuclease 1A [Arabidopsis thaliana] 7.0e-15
FL-Next: sp=Crossover junction endonuclease EME1B; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative uncharacterized protein At2g21800 4.916e-10
Internal
sp_v3.0_unigene112870 SustainPine v3.0 595
AutoFact: essential meiotic endonuclease 1A [Arabidopsis thaliana] gb|AAP21264.1| At2g21800 [Arabidopsis thaliana] dbj|BAE99972.1| hypothetical protein [Arabidopsis thaliana] gb|AEC07223.1| essential meiotic endonuclease 1A [Arabidopsis thaliana] 0.0
FL-Next: sp=Crossover junction endonuclease EME1; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Putative uncharacterized protein At2g21800 5.358e-10
Internal
sp_v3.0_unigene115143 SustainPine v3.0 337
AutoFact: endonuclease [Arabidopsis thaliana] 6.0e-23
FL-Next: sp=Crossover junction endonuclease MUS81; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene123041 SustainPine v3.0 518
AutoFact: endonuclease [Arabidopsis thaliana] 1.0e-15
FL-Next: sp=Crossover junction endonuclease MUS81; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene124460 SustainPine v3.0 265
AutoFact: 5' repair endonuclease [Arabidopsis thaliana] 9.0e-27
FL-Next: sp=DNA repair endonuclease UVH1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Ultraviolet hypersensitive 1 3.343e-09
Internal
sp_v3.0_unigene149342 SustainPine v3.0 110
AutoFact: 5' repair endonuclease [Arabidopsis thaliana] 1.0e-06
FL-Next: Isoform 2 of DNA repair endonuclease UVH1 OS=Arabidopsis thaliana GN=UVH1 0.0
Internal
sp_v3.0_unigene167159 SustainPine v3.0 141
AutoFact: essential meiotic endonuclease 1A [Arabidopsis thaliana] gb|AAP21264.1| At2g21800 [Arabidopsis thaliana] dbj|BAE99972.1| hypothetical protein [Arabidopsis thaliana] gb|AEC07223.1| essential meiotic endonuclease 1A [Arabidopsis thaliana] 5.0e-10
FL-Next: sp=Crossover junction endonuclease EME1B; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain