Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Domain of unknown function DUF382

Term: IPR007180  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene3431 SustainPine v3.0 708
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_818.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7TRX8_VITVI 2.99878e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Spliceosome associated protein-like 3.954e-09
Putative C-terminus
sp_v3.0_unigene5685 SustainPine v3.0 1128
AutoFact: Splicing factor 3B subunit 2 n=3 Tax=Arabidopsis RepID=F4JJM1_ARATH 0.0
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: Spliceosome associated protein-like 5.707e-09
Putative N-terminus
sp_v3.0_unigene13564 SustainPine v3.0 376
AutoFact: Splicing factor 3B subunit, putative n=1 Tax=Ricinus communis RepID=B9RZ56_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Spliceosome associated protein-like 7.485e-09
N-terminus
sp_v3.0_unigene20443 SustainPine v3.0 442
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_818.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7TRX8_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Spliceosome associated protein-like 3.954e-09
Putative C-terminus
sp_v3.0_unigene24122 SustainPine v3.0 1206
AutoFact: splicing factor 3B subunit 2 [Arabidopsis thaliana] gb|AAN72024.1| spliceosome associated protein - like [Arabidopsis thaliana] gb|AAQ65180.1| At4g21660 [Arabidopsis thaliana] gb|AEE84486.1| splicing factor 3B subunit 2 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Sma3: Spliceosome associated protein-like 5.965e-09
Putative N-terminus
sp_v3.0_unigene73514 SustainPine v3.0 249
AutoFact: spliceosome associated protein-like [Arabidopsis thaliana] emb|CAB81273.1| spliceosome associated protein-like [Arabidopsis thaliana] 1.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene77499 SustainPine v3.0 477
AutoFact: spliceosome assembly-related protein [Cryptococcus neoformans var. neoformans JEC21] ref|XP_774184.1| hypothetical protein CNBG1660 [Cryptococcus neoformans var. neoformans B-3501A] gb|EAL19537.1| hypothetical protein CNBG1660 [Cryptococcus neoformans var 0.0
FL-Next: tr=Splicing factor 3B subunit; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Sma3: Spliceosome associated protein-like 7.054e-09
Internal
sp_v3.0_unigene78071 SustainPine v3.0 235
AutoFact: Splicing factor 3B subunit, putative n=1 Tax=Ricinus communis RepID=B9RZ56_RICCO 3.0e-25
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: Spliceosome associated protein-like 5.965e-09
Internal
sp_v3.0_unigene99419 SustainPine v3.0 1260
AutoFact: [A] COG5182 Splicing factor 3b, subunit 2 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Spliceosome associated protein-like 6.363e-09
N-terminus
sp_v3.0_unigene142994 SustainPine v3.0 226
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene156666 SustainPine v3.0 411
AutoFact: spliceosome associated protein-like [Arabidopsis thaliana] emb|CAB81273.1| spliceosome associated protein-like [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Sma3: Spliceosome associated protein-like 7.485e-09
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain