Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: DNA-directed RNA pol I, largest subunit

Term: IPR015699  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene2956 SustainPine v3.0 1564
AutoFact: DNA-directed RNA polymerase n=1 Tax=Selaginella moellendorffii RepID=D8SDS6_SELML 0.0
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA-directed RNA polymerase 1.541e-08
Internal
sp_v3.0_unigene26543 SustainPine v3.0 435
AutoFact: DNA-directed RNA polymerase n=1 Tax=Blastocystis hominis RepID=D8LZZ3_BLAHO 5.0e-35
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA-directed RNA polymerase 2.855e-11
Internal
sp_v3.0_unigene33075 SustainPine v3.0 819
AutoFact: DUF659 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene40004 SustainPine v3.0 181
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Vitis vinifera RepID=D7TI03_VITVI 4.0e-17
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative RNA polymerase A(I) large subunit 1.458e-13
Internal
sp_v3.0_unigene41882 SustainPine v3.0 313
AutoFact: DUF659 domain containing protein 1.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene44586 SustainPine v3.0 424
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Pinus nigra RepID=Q2TUP3_9CONI 0.0
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA-directed RNA polymerase 0.0
Internal
sp_v3.0_unigene49057 SustainPine v3.0 137
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Pinus nigra RepID=Q2TUP3_9CONI 3.0e-18
FL-Next: sp=DNA-directed RNA polymerase; Selaginella moellendorffii (Spikemoss). 0.0
Sma3: DNA-directed RNA polymerase 4.18e-23
Internal
sp_v3.0_unigene52526 SustainPine v3.0 401
AutoFact: DUF659 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene55939 SustainPine v3.0 186
AutoFact: DNA-directed RNA polymerase n=1 Tax=Selaginella moellendorffii RepID=D8SDS6_SELML 6.0e-22
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA-directed RNA polymerase 0.0
Internal
sp_v3.0_unigene56343 SustainPine v3.0 295
AutoFact: DUF659 domain containing protein 4.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene64827 SustainPine v3.0 156
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Pinus nigra RepID=Q2TUP3_9CONI 6.0e-22
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA-directed RNA polymerase 2.799e-28
Internal
sp_v3.0_unigene73982 SustainPine v3.0 496
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Marasmius alliaceus RepID=Q5I2D9_9AGAR 0.0
FL-Next: sp=DNA-directed RNA polymerase subunit beta''; Nageia nagi. Plastid; Chloroplast. 0.0
Sma3: DNA-directed RNA polymerase 0.0
Internal
sp_v3.0_unigene93960 SustainPine v3.0 1377
AutoFact: DUF659 multi-domain protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene96158 SustainPine v3.0 416
AutoFact: DNA-directed RNA polymerase (Fragment) n=2 Tax=Spermatophyta RepID=Q2TUM9_9CONI 0.0
FL-Next: sp=DNA-directed RNA polymerase subunit beta''; Agathis australis (Kauri) (Dammara australis). Plastid; Chloroplast. 0.0
Sma3: DNA-directed RNA polymerase 5.497e-32
Internal
sp_v3.0_unigene113453 SustainPine v3.0 453
AutoFact: DUF659 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene114847 SustainPine v3.0 380
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Vitis vinifera RepID=D7TI03_VITVI 2.0e-39
FL-Next: sp=DNA-directed RNA polymerase; Pinus taiwanensis. Plastid; Chloroplast. 0.0
Sma3: DNA-directed RNA polymerase 1.032e-34
Internal
sp_v3.0_unigene116171 SustainPine v3.0 316
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Pinus nigra RepID=Q2TUP3_9CONI 2.0e-29
FL-Next: sp=DNA-directed RNA polymerase; Selaginella moellendorffii (Spikemoss). 0.0
Sma3: DNA-directed RNA polymerase 4.546e-08
Internal
sp_v3.0_unigene126750 SustainPine v3.0 892
AutoFact: DUF659 domain containing protein 1.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene128427 SustainPine v3.0 577
AutoFact: DUF659 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA binding protein, putative 1.453e-07
Putative N-terminus
sp_v3.0_unigene133065 SustainPine v3.0 487
AutoFact: DUF659 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain