Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: DNA mismatch repair protein MutS-like, N-terminal

Term: IPR007695  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene64754 SustainPine v3.0 170
AutoFact: putative mismatch binding protein Mus3 [Oryza sativa Japonica Group] dbj|BAD36299.1| putative mismatch binding protein Mus3 [Oryza sativa Japonica Group] 4.0e-26
FL-Next: sp=DNA mismatch repair protein MSH6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene69853 SustainPine v3.0 433
AutoFact: DNA mismatch repair protein n=1 Tax=Cucumis sativus RepID=B3U2A3_CUCSA 1.0e-36
FL-Next: sp=DNA mismatch repair protein MSH1, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA mismatch repair protein 2.271e-22
Internal
sp_v3.0_unigene72566 SustainPine v3.0 285
AutoFact: putative DNA mismatch repair protein [Arabidopsis thaliana] 1.0e-22
FL-Next: sp=DNA mismatch repair protein Msh3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene72641 SustainPine v3.0 150
AutoFact: cleavage/polyadenylation specificity factor [Arabidopsis thaliana] dbj|BAC42701.1| unknown protein [Arabidopsis thaliana] gb|AAO63939.1| unknown protein [Arabidopsis thaliana] dbj|BAF00402.1| hypothetical protein [Arabidopsis thaliana] gb|AEE85076.1| clea 1.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene75124 SustainPine v3.0 363
AutoFact: DNA mismatch repair protein [Zea mays] gb|AAX53096.1| DNA mismatch repair protein [Zea mays] 3.0e-15
FL-Next: sp=DNA mismatch repair protein MSH1, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA mismatch repair protein 6.01e-15
C-terminus
sp_v3.0_unigene77591 SustainPine v3.0 193
AutoFact: DNA mismatch repair protein [Petunia x hybrida] 2.0e-11
FL-Next: sp=DNA mismatch repair protein Msh3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene77673 SustainPine v3.0 350
AutoFact: cleavage and polyadenylation specific factor 5 [Coprinopsis cinerea okayama7#130] gb|EAU83620.1| cleavage and polyadenylation specific factor 5 [Coprinopsis cinerea okayama7#130] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MRNA cleavage factor subunit-like protein 1.501e-09
Putative C-terminus
sp_v3.0_unigene94491 SustainPine v3.0 829
AutoFact: PREDICTED: similar to KEA1 (K EFFLUX ANTIPORTER 1); potassium:hydrogen antiporter n=1 Tax=Vitis vinifera RepID=UPI0001984E30 0.0
FL-Next: sp=K(+) efflux antiporter 2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene95337 SustainPine v3.0 308
AutoFact: DNA mismatch repair protein n=1 Tax=Cucumis sativus RepID=B3U2A3_CUCSA 5.0e-24
FL-Next: sp=DNA mismatch repair protein MSH1, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA mismatch repair protein 9.412e-23
Putative C-terminus
sp_v3.0_unigene102706 SustainPine v3.0 536
AutoFact: DNA mismatch repair protein Msh3 [Arabidopsis thaliana] sp|O65607.2|MSH3_ARATH RecName: Full=DNA mismatch repair protein Msh3; Short=AtMsh3 emb|CAA07684.1| Msh3 protein [Arabidopsis thaliana] gb|AEE85075.1| DNA mismatch repair protein Msh3 [Arabidopsis th 3.0e-34
FL-Next: sp=DNA mismatch repair protein Msh3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene104452 SustainPine v3.0 233
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RNF5_RICCO 3.0e-16
FL-Next: sp=DNA mismatch repair protein MSH6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene110224 SustainPine v3.0 440
AutoFact: Unassigned protein
FL-Next: sp=DNA mismatch repair protein MSH1, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene116527 SustainPine v3.0 758
AutoFact: DNA mismatch repair protein n=3 Tax=Arabidopsis RepID=Q84LK0_ARATH 0.0
FL-Next: sp=DNA mismatch repair protein MSH1, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA mismatch repair protein 4.076e-22
Internal
sp_v3.0_unigene123466 SustainPine v3.0 348
AutoFact: DNA mismatch repair protein [Petunia x hybrida] 9.0e-18
FL-Next: sp=DNA mismatch repair protein MSH6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene139632 SustainPine v3.0 400
AutoFact: MutS homolog 7 [Triticum aestivum] 5.0e-20
FL-Next: sp=DNA mismatch repair protein MSH7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: MutS homolog 7 3.114e-09
Internal
sp_v3.0_unigene155994 SustainPine v3.0 265
AutoFact: cleavage and polyadenylation specificity factor subunit 5 [Aspergillus niger CBS 513.88] emb|CAK42804.1| unnamed protein product [Aspergillus niger] 8.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene157002 SustainPine v3.0 425
AutoFact: putative mismatch binding protein Mus3 [Oryza sativa Japonica Group] dbj|BAD36299.1| putative mismatch binding protein Mus3 [Oryza sativa Japonica Group] 8.0e-09
FL-Next: sp=DNA mismatch repair protein MSH6; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene159400 SustainPine v3.0 474
AutoFact: PREDICTED: DNA mismatch repair protein Msh6-like n=1 Tax=Anolis carolinensis RepID=UPI000203838B 0.0
FL-Next: sp=DNA mismatch repair protein MSH7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: MutS homolog 7 5.347e-08
Internal
sp_v3.0_unigene164242 SustainPine v3.0 202
AutoFact: MutS homolog 7 [Arabidopsis thaliana] 9.0e-16
FL-Next: sp=DNA mismatch repair protein MSH7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: MutS homolog 7 3.168e-09
Internal
sp_v3.0_unigene166253 SustainPine v3.0 284
AutoFact: MutS homolog 7 [Triticum aestivum] 1.0e-33
FL-Next: sp=DNA mismatch repair protein MSH7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: MutS homolog 7 2.626e-08
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain