Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: DNA mismatch repair protein MutS, C-terminal

Term: IPR000432  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene122440 SustainPine v3.0 275
AutoFact: DNA mismatch repair protein MutS2 [Arabidopsis thaliana] gb|AAF06041.1|AC009360_6 Contains similarity to gb|D90908 DNA mismatch repair protein MutS2 from Synechocystis sp. and is a member of PF|00488 Muts family of mismatch repair proteins [Arabidopsis th 4.0e-23
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene123466 SustainPine v3.0 348
AutoFact: DNA mismatch repair protein [Petunia x hybrida] 9.0e-18
FL-Next: sp=DNA mismatch repair protein MSH6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene139632 SustainPine v3.0 400
AutoFact: MutS homolog 7 [Triticum aestivum] 5.0e-20
FL-Next: sp=DNA mismatch repair protein MSH7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: MutS homolog 7 3.114e-09
Internal
sp_v3.0_unigene155994 SustainPine v3.0 265
AutoFact: cleavage and polyadenylation specificity factor subunit 5 [Aspergillus niger CBS 513.88] emb|CAK42804.1| unnamed protein product [Aspergillus niger] 8.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene157002 SustainPine v3.0 425
AutoFact: putative mismatch binding protein Mus3 [Oryza sativa Japonica Group] dbj|BAD36299.1| putative mismatch binding protein Mus3 [Oryza sativa Japonica Group] 8.0e-09
FL-Next: sp=DNA mismatch repair protein MSH6; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene159400 SustainPine v3.0 474
AutoFact: PREDICTED: DNA mismatch repair protein Msh6-like n=1 Tax=Anolis carolinensis RepID=UPI000203838B 0.0
FL-Next: sp=DNA mismatch repair protein MSH7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: MutS homolog 7 5.347e-08
Internal
sp_v3.0_unigene161516 SustainPine v3.0 318
AutoFact: DNA mismatch repair protein [Arabidopsis thaliana] dbj|BAF02028.1| putative DNA mismatch repair protein [Arabidopsis thaliana] 8.0e-14
FL-Next: sp=DNA mismatch repair protein MSH5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene164242 SustainPine v3.0 202
AutoFact: MutS homolog 7 [Arabidopsis thaliana] 9.0e-16
FL-Next: sp=DNA mismatch repair protein MSH7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: MutS homolog 7 3.168e-09
Internal
sp_v3.0_unigene166253 SustainPine v3.0 284
AutoFact: MutS homolog 7 [Triticum aestivum] 1.0e-33
FL-Next: sp=DNA mismatch repair protein MSH7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: MutS homolog 7 2.626e-08
Internal
sp_v3.0_unigene167140 SustainPine v3.0 307
AutoFact: DNA mismatch repair protein MutS2-like [Arabidopsis thaliana] 4.0e-38
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene167790 SustainPine v3.0 168
AutoFact: putative DNA mismatch repair protein [Arabidopsis thaliana] 8.0e-09
FL-Next: sp=DNA mismatch repair protein Msh3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene183999 SustainPine v3.0 379
AutoFact: Mismatch repair protein n=1 Tax=Solanum lycopersicum RepID=D6QY20_SOLLC 0.0
FL-Next: sp=DNA mismatch repair protein MSH2; Zea mays (Maize). 0.0
Sma3: DNA mismatch repair protein MSH2 4.49e-09
Internal
sp_v3.0_unigene190239 SustainPine v3.0 517
AutoFact: cleavage/polyadenylation specificity factor [Arabidopsis thaliana] dbj|BAC42701.1| unknown protein [Arabidopsis thaliana] gb|AAO63939.1| unknown protein [Arabidopsis thaliana] dbj|BAF00402.1| hypothetical protein [Arabidopsis thaliana] gb|AEE85076.1| clea 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pre-mRNA cleavage factor im, 25kD subunit, putative 3.279e-09
Complete
sp_v3.0_unigene193089 SustainPine v3.0 403
AutoFact: GI12236 n=1 Tax=Drosophila mojavensis RepID=B4L131_DROMO 9.0e-26
FL-Next: sp=DNA mismatch repair protein MSH7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene208766 SustainPine v3.0 338
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain