Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ribosomal protein S3Ae

Term: IPR001593  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene51428 SustainPine v3.0 683
AutoFact: RecName: Full=40S ribosomal protein S3a emb|CAD56219.1| ribosomal protein S3a [Cicer arietinum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S3a 6.292e-17
Putative N-terminus
sp_v3.0_unigene61193 SustainPine v3.0 161
AutoFact: 40S ribosomal protein S3a n=7 Tax=Oryza sativa RepID=RS3A_ORYSJ 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S3a 2.884e-17
Internal
sp_v3.0_unigene69720 SustainPine v3.0 188
AutoFact: Leucine-rich repeat/extensin n=2 Tax=Nicotiana RepID=A3KD20_NICPL 7.0e-10
FL-Next: sp=Leucine-rich repeat extensin-like protein 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Extensin-like protein 3.675e-12
Internal
sp_v3.0_unigene71153 SustainPine v3.0 406
AutoFact: 40S ribosomal protein (Fragment) n=2 Tax=Pooideae RepID=Q7X9K6_WHEAT 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein 0.0
C-terminus
sp_v3.0_unigene74049 SustainPine v3.0 336
AutoFact: 40S ribosomal protein S1 n=4 Tax=Agaricales RepID=RS3A_COPC7 5.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S3a 7.492e-21
Internal
sp_v3.0_unigene74077 SustainPine v3.0 361
AutoFact: 40S ribosomal protein S3a n=2 Tax=Chlamydomonadales RepID=RS3A_CHLRE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S3a 1.016e-20
Internal
sp_v3.0_unigene80633 SustainPine v3.0 88
AutoFact: 40S ribosomal protein S1 n=3 Tax=Filobasidiella/Cryptococcus neoformans species complex RepID=RS3A_CRYNB 3.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene95574 SustainPine v3.0 573
AutoFact: leucine-rich repeat/extensin [Nicotiana plumbaginifolia] dbj|BAF48664.1| leucine-rich repeat/extensin [Nicotiana plumbaginifolia] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Extensin-like protein 4.04e-31
Internal
sp_v3.0_unigene99888 SustainPine v3.0 484
AutoFact: Unassigned protein
FL-Next: tr=Glycosyl hydrolase family protein 43, putative, expressed; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene124745 SustainPine v3.0 306
AutoFact: 40S ribosomal protein S3a n=5 Tax=Neoptera RepID=RS3A_BIPLU 8.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cyc07 protein 1.397e-08
Putative C-terminus
sp_v3.0_unigene126176 SustainPine v3.0 582
AutoFact: leucine-rich repeat extensin-like protein 3 [Arabidopsis thaliana] sp|Q9T0K5.1|LRX3_ARATH RecName: Full=Leucine-rich repeat extensin-like protein 3; Short=AtLRX3; Short=LRR/EXTENSIN3; AltName: Full=Cell wall hydroxyproline-rich glycoprotein; Flags: Precur 0.0
FL-Next: tr=Receptor protein kinase; Pinus sylvestris (Scots pine). 0.0
Sma3: Extensin-like protein 3.313e-28
Internal
sp_v3.0_unigene128288 SustainPine v3.0 456
AutoFact: leucine-rich repeat extensin-like protein 3 [Arabidopsis thaliana] sp|Q9T0K5.1|LRX3_ARATH RecName: Full=Leucine-rich repeat extensin-like protein 3; Short=AtLRX3; Short=LRR/EXTENSIN3; AltName: Full=Cell wall hydroxyproline-rich glycoprotein; Flags: Precur 8.00141e-43
FL-Next: tr=Receptor protein kinase; Pinus sylvestris (Scots pine). 0.0
Sma3: Extensin-like protein 5.095e-26
Internal
sp_v3.0_unigene132940 SustainPine v3.0 235
AutoFact: ribosomal S3a [Musa acuminata] 5.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S3a 5.872e-21
C-terminus
sp_v3.0_unigene140283 SustainPine v3.0 347
AutoFact: Leucine-rich repeat extensin-like protein 4 n=2 Tax=Arabidopsis RepID=LRX4_ARATH 2.0e-26
FL-Next: sp=Leucine-rich repeat extensin-like protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Extensin-like protein 4.587e-09
Internal
sp_v3.0_unigene143120 SustainPine v3.0 249
AutoFact: leucine-rich repeat extensin-like protein 3 [Arabidopsis thaliana] sp|Q9T0K5.1|LRX3_ARATH RecName: Full=Leucine-rich repeat extensin-like protein 3; Short=AtLRX3; Short=LRR/EXTENSIN3; AltName: Full=Cell wall hydroxyproline-rich glycoprotein; Flags: Precur 2.0e-16
FL-Next: tr=Uncharacterized protein; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Sma3: Extensin-like protein 1.634e-12
Internal
sp_v3.0_unigene145718 SustainPine v3.0 716
AutoFact: RecName: Full=40S ribosomal protein S3a emb|CAD56219.1| ribosomal protein S3a [Cicer arietinum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S3a 1.5e-24
Misassembled
sp_v3.0_unigene145808 SustainPine v3.0 426
AutoFact: 40S ribosomal protein S3a (Fragment) n=1 Tax=Pseudotsuga menziesii var. menziesii RepID=Q5MEK4_PSEMZ 2.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S3a 0.0
C-terminus
sp_v3.0_unigene145852 SustainPine v3.0 613
AutoFact: 40S ribosomal protein S3a-2 [Arabidopsis thaliana] sp|Q42262.3|RS3A2_ARATH RecName: Full=40S ribosomal protein S3a-2 emb|CAA04689.1| Putative S-phase-specific ribosomal protein [Arabidopsis thaliana] emb|CAA18846.1| Putative S-phase-specific ribosomal pro 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S3a 4.672e-17
Complete
sp_v3.0_unigene145911 SustainPine v3.0 569
AutoFact: RecName: Full=40S ribosomal protein S3a; AltName: Full=Protein cyc07 gb|ABA41527.1| cyc07 [Nicotiana tabacum] 5.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S3a 9.573e-25
C-terminus
sp_v3.0_unigene150353 SustainPine v3.0 288
AutoFact: 40S ribosomal protein S3a n=2 Tax=Chlamydomonadales RepID=RS3A_CHLRE 1.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S3a 3.295e-17
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain