Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Rhamnogalacturonate lyase

Term: IPR010325  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene2367 SustainPine v3.0 2817
AutoFact: O-FucT domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Putative auxin-independent growth promoter 1.658e-16
Complete
sp_v3.0_unigene2990 SustainPine v3.0 2315
AutoFact: rhamnogalacturonate lyase-like protein [Arabidopsis thaliana] gb|AEE28513.1| rhamnogalacturonate lyase-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Lyase, putative 3.464e-27
Complete
sp_v3.0_unigene4223 SustainPine v3.0 2320
AutoFact: O-fucosyltransferase family protein [Arabidopsis thaliana] gb|AAQ89634.1| At1g14020 [Arabidopsis thaliana] dbj|BAF01665.1| growth regulator like protein [Arabidopsis thaliana] dbj|BAF01818.1| growth regulator like protein [Arabidopsis thaliana] gb|AEE2909 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative auxin-independent growth promoter 2.786e-22
C-terminus
sp_v3.0_unigene4385 SustainPine v3.0 814
AutoFact: rhamnogalacturonate lyase-like protein [Arabidopsis thaliana] gb|AEE28513.1| rhamnogalacturonate lyase-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Lyase, putative 2.067e-27
N-terminus
sp_v3.0_unigene4667 SustainPine v3.0 319
AutoFact: Copia-type polyprotein, putative n=4 Tax=Arabidopsis thaliana RepID=Q9C739_ARATH 6.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 3.468e-31
Internal
sp_v3.0_unigene6352 SustainPine v3.0 2342
AutoFact: O-fucosyltransferase family protein [Arabidopsis thaliana] gb|AAC67324.1| similar to axi 1 protein from Nicotiana tabacum [Arabidopsis thaliana] gb|AAM13108.1| similar to axi 1 protein [Arabidopsis thaliana] gb|AAM91218.1| similar to axi 1 protein [Arabid 0.0
FL-Next: tr=Uncharacterized protein; Brachypodium distachyon (Purple false brome) (Trachynia distachya). 0.0
Sma3: Putative auxin-independent growth promoter 5.134e-16
Complete
sp_v3.0_unigene7007 SustainPine v3.0 2036
AutoFact: O-fucosyltransferase family protein [Arabidopsis thaliana] dbj|BAB02197.1| unnamed protein product [Arabidopsis thaliana] dbj|BAE98825.1| hypothetical protein [Arabidopsis thaliana] gb|AEE77150.1| O-fucosyltransferase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: Auxin-independent growth promoter-like protein 2.616e-08
Complete
sp_v3.0_unigene7040 SustainPine v3.0 2284
AutoFact: O-FucT domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Putative auxin-independent growth promoter 1.982e-29
Complete
sp_v3.0_unigene8124 SustainPine v3.0 2208
AutoFact: O-FucT domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative auxin-independent growth promoter 1.485e-25
C-terminus
sp_v3.0_unigene10392 SustainPine v3.0 2492
AutoFact: O-fucosyltransferase-like protein [Arabidopsis thaliana] gb|AAK25969.1|AF360259_1 putative axi 1 protein from Nicotiana tabacum [Arabidopsis thaliana] gb|AAN71964.1| putative axi 1 protein from Nicotiana tabacum [Arabidopsis thaliana] gb|AEC09474.1| O-fuc 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative auxin-independent growth promoter 1.356e-22
Complete
sp_v3.0_unigene10987 SustainPine v3.0 2541
AutoFact: O-fucosyltransferase family protein [Arabidopsis thaliana] gb|AAC67324.1| similar to axi 1 protein from Nicotiana tabacum [Arabidopsis thaliana] gb|AAM13108.1| similar to axi 1 protein [Arabidopsis thaliana] gb|AAM91218.1| similar to axi 1 protein [Arabid 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Growth regulator like protein 7.177e-15
Complete
sp_v3.0_unigene11203 SustainPine v3.0 346
AutoFact: O-fucosyltransferase family protein [Arabidopsis thaliana] gb|AED97925.1| O-fucosyltransferase family protein [Arabidopsis thaliana] 1.99993e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Growth regulator like protein 4.611e-18
Internal
sp_v3.0_unigene13239 SustainPine v3.0 815
AutoFact: Gag and Pol n=1 Tax=Zea mays RepID=Q8LSK0_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 0.0
N-terminus
sp_v3.0_unigene13833 SustainPine v3.0 1021
AutoFact: rhamnogalacturonate lyase-like protein [Arabidopsis thaliana] gb|AAB60741.1| F21M12.27 gene product [Arabidopsis thaliana] gb|AEE28510.1| rhamnogalacturonate lyase-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Lyase, putative 2.395e-27
Putative N-terminus
sp_v3.0_unigene19340 SustainPine v3.0 990
AutoFact: O-fucosyltransferase family protein [Arabidopsis thaliana] gb|AED97925.1| O-fucosyltransferase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative auxin-independent growth promoter 2.874e-22
C-terminus
sp_v3.0_unigene22146 SustainPine v3.0 670
AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.064e-38
Internal
sp_v3.0_unigene23498 SustainPine v3.0 2691
AutoFact: O-fucosyltransferase family protein [Arabidopsis thaliana] gb|AAM26669.1| AT4g16650/dl4350w [Arabidopsis thaliana] gb|AAN18192.1| At4g16650/dl4350w [Arabidopsis thaliana] dbj|BAD43586.1| growth regulator like protein [Arabidopsis thaliana] gb|AEE83780.1| 0.0
FL-Next: sp=DUF246 domain-containing protein At1g04910; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative auxin-independent growth promoter 1.016e-25
Complete
sp_v3.0_unigene23703 SustainPine v3.0 360
AutoFact: Lyase, putative n=1 Tax=Ricinus communis RepID=B9SMY7_RICCO 1.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Lyase, putative 1.183e-27
Putative N-terminus
sp_v3.0_unigene26978 SustainPine v3.0 3015
AutoFact: O-FucT domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Putative auxin-independent growth promoter 1.898e-22
Complete
sp_v3.0_unigene28886 SustainPine v3.0 449
AutoFact: rhamnogalacturonate lyase-like protein [Arabidopsis thaliana] gb|AAB60741.1| F21M12.27 gene product [Arabidopsis thaliana] gb|AEE28510.1| rhamnogalacturonate lyase-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Lyase, putative 1.344e-27
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain