Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, C2H2-type/integrase, DNA-binding

Term: IPR013087  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene2339 SustainPine v3.0 1127
AutoFact: [R] COG5048 FOG: Zn-finger 3.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Transcription factor IIIA 1.228e-12
Putative C-terminus
sp_v3.0_unigene3136 SustainPine v3.0 3007
AutoFact: Med15 domain containing protein 4.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative transparent testa 1 2.751e-08
Complete
sp_v3.0_unigene10211 SustainPine v3.0 2307
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: C2-H2 zinc finger protein 7.93e-09
Complete
sp_v3.0_unigene10988 SustainPine v3.0 1337
AutoFact: PREDICTED: zinc finger protein 546-like isoform 2 [Macaca mulatta] 1.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene16455 SustainPine v3.0 1392
AutoFact: Nucleic acid binding protein (Fragment) n=1 Tax=Cucumis melo subsp. melo RepID=E5GBX4_CUCME 4.99983e-42
FL-Next: sp=Lysine-specific demethylase REF6; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene18480 SustainPine v3.0 999
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene20665 SustainPine v3.0 1221
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene24699 SustainPine v3.0 1154
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene39692 SustainPine v3.0 141
AutoFact: transcription factor jumonji (jmjC) domain-containing protein [Arabidopsis thaliana] gb|AAK64062.1| putative RB-binding protein [Arabidopsis thaliana] gb|AAS46255.1| putative RB-binding protein [Arabidopsis thaliana] gb|AEE34105.1| transcription factor ju 3.0e-21
FL-Next: Isoform 2 of Probable lysine-specific demethylase JMJ14 OS=Arabidopsis thaliana GN=JMJ14 0.0
Sma3: Jumonji domain protein 3.228e-20
Internal
sp_v3.0_unigene43986 SustainPine v3.0 1305
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative transparent testa 1 1.79e-08
C-terminus
sp_v3.0_unigene49249 SustainPine v3.0 1048
AutoFact: relative of early flowering 6 protein [Arabidopsis thaliana] emb|CAB41155.1| putative zinc finger protein [Arabidopsis thaliana] gb|AAT77779.1| relative of early flowering 6 [Arabidopsis thaliana] gb|AEE78416.1| relative of early flowering 6 protein [Arab 0.0
FL-Next: sp=Lysine-specific demethylase REF6; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene52346 SustainPine v3.0 348
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene54168 SustainPine v3.0 161
AutoFact: Nucleic acid binding protein n=4 Tax=Zea mays RepID=B6THI3_MAIZE 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative transparent testa 1 1.951e-08
Internal
sp_v3.0_unigene55671 SustainPine v3.0 241
AutoFact: Nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9RAP0_RICCO 1.0e-23
FL-Next: sp=Lysine-specific demethylase REF6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene56250 SustainPine v3.0 467
AutoFact: [R] COG5048 FOG: Zn-finger 4.0e-05
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene63237 SustainPine v3.0 199
AutoFact: relative of early flowering 6 protein [Arabidopsis thaliana] emb|CAB41155.1| putative zinc finger protein [Arabidopsis thaliana] gb|AAT77779.1| relative of early flowering 6 [Arabidopsis thaliana] gb|AEE78416.1| relative of early flowering 6 protein [Arab 2.0e-19
FL-Next: sp=Lysine-specific demethylase REF6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: JmjC domain containing protein, expressed 4.621e-08
Internal
sp_v3.0_unigene64310 SustainPine v3.0 166
AutoFact: [R] COG5048 FOG: Zn-finger 6.0e-05
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene65632 SustainPine v3.0 186
AutoFact: Nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9SSP5_RICCO 6.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene68001 SustainPine v3.0 140
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene76923 SustainPine v3.0 222
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative transparent testa 1 1.701e-08
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain