Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Thermonuclease active site

Term: IPR002071  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene2246 SustainPine v3.0 1642
AutoFact: Ca(2+)-dependent DNase [Populus tomentosa] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein At2g40410 4.755e-09
Complete
sp_v3.0_unigene9413 SustainPine v3.0 1574
AutoFact: Ca(2+)-dependent DNase [Populus tomentosa] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein At2g40410 4.755e-09
Misassembled
sp_v3.0_unigene11298 SustainPine v3.0 450
AutoFact: Ca(2+)-dependent nuclease-like protein n=1 Tax=Arabidopsis thaliana RepID=Q8RWK9_ARATH 2.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein At2g40410 4.916e-10
N-terminus
sp_v3.0_unigene22705 SustainPine v3.0 970
AutoFact: Ca(2+)-dependent DNase [Populus tomentosa] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nuclease 4.17e-09
C-terminus
sp_v3.0_unigene57155 SustainPine v3.0 321
AutoFact: Ca(2+)-dependent DNase [Populus tomentosa] 2.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein At2g40410 5.358e-10
N-terminus
sp_v3.0_unigene165629 SustainPine v3.0 531
AutoFact: [L] COG1525 Micrococcal nuclease (thermonuclease) homologs 2.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nuclease 3.801e-09
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain