Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Glycoside hydrolase, family 13, N-terminal

Term: IPR004193  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene2065 SustainPine v3.0 2076
AutoFact: 5'-AMP-activated protein kinase-like protein n=3 Tax=Arabidopsis RepID=Q9LFY0_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SKIP interacting protein 4 6.335e-06
Putative Complete
sp_v3.0_unigene3752 SustainPine v3.0 2065
AutoFact: protein limit dextrinase [Arabidopsis thaliana] sp|Q8GTR4.2|PULA1_ARATH RecName: Full=Pullulanase 1, chloroplastic; Short=AtPU1; AltName: Full=Protein LIMIT DEXTRINASE; Short=AtLDA; Flags: Precursor gb|AED90732.1| protein limit dextrinase [Arabidopsis tha 0.0
FL-Next: sp=Pullulanase 1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Pullulanase-type starch debranching enzyme 1.826e-12
C-terminus
sp_v3.0_unigene3977 SustainPine v3.0 1320
AutoFact: Isoamylase isoform 2 n=1 Tax=Pisum sativum RepID=Q105A1_PEA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Isoamylase isoform 2 1.302e-13
Complete
sp_v3.0_unigene5595 SustainPine v3.0 1384
AutoFact: starch branching enzyme I [Pisum sativum] 5.60519e-45
FL-Next: sp=1,4-alpha-glucan-branching enzyme 2-2, chloroplastic/amyloplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Starch branching enzyme II 6.846e-16
N-terminus
sp_v3.0_unigene6455 SustainPine v3.0 4010
AutoFact: RecName: Full=Putative transcription elongation factor SPT5 homolog 1 emb|CAB52557.1| putative protein [Arabidopsis thaliana] emb|CAB77960.1| putative protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Putative transcription elongation factor SPT5 homolog 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: RNA polymerase II transcription elongation factor SPT5 8.893e-09
Complete
sp_v3.0_unigene8018 SustainPine v3.0 1857
AutoFact: 5'-AMP-activated protein kinase-like protein [Arabidopsis thaliana] gb|AAF79876.1|AC000348_29 T7N9.13 [Arabidopsis thaliana] gb|AEE30776.1| 5'-AMP-activated protein kinase-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SKIP interacting protein 4 6.335e-06
C-terminus
sp_v3.0_unigene13192 SustainPine v3.0 3626
AutoFact: Starch branching enzyme II-2 n=2 Tax=Malus x domestica RepID=A4GW34_MALDO 0.0
FL-Next: sp=1,4-alpha-glucan-branching enzyme 2-2, chloroplastic/amyloplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Starch branching enzyme I 5.906e-26
Complete
sp_v3.0_unigene13637 SustainPine v3.0 3137
AutoFact: isoamylase isoform 3 [Solanum tuberosum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Isoamylase 3.768e-16
Complete
sp_v3.0_unigene15213 SustainPine v3.0 300
AutoFact: Starch-branching enzyme-like protein n=5 Tax=Arabidopsis RepID=Q9LTP8_ARATH 8.0e-17
FL-Next: Isoform 2 of 1,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic OS=Arabidopsis thaliana GN=SBE3 0.0
Internal
sp_v3.0_unigene16104 SustainPine v3.0 669
AutoFact: putative isoamylase-type starch debranching enzyme ISO2 [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Isoamylase 2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Isoamylase isoform 2 1.521e-12
Internal
sp_v3.0_unigene19110 SustainPine v3.0 316
AutoFact: putative starch branching enzyme [Populus trichocarpa] 1.0e-20
FL-Next: Isoform 2 of 1,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic OS=Arabidopsis thaliana GN=SBE3 0.0
Internal
sp_v3.0_unigene24237 SustainPine v3.0 3320
AutoFact: 1,4-alpha-glucan branching enzyme (Fragment) n=1 Tax=Solanum tuberosum RepID=O04864_SOLTU 0.0
FL-Next: sp=1,4-alpha-glucan-branching enzyme; Solanum tuberosum (Potato). 0.0
Sma3: Starch branching enzyme I 3.847e-26
Putative Complete
sp_v3.0_unigene37375 SustainPine v3.0 2351
AutoFact: isoamylase isoform 1 [Solanum tuberosum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Isoamylase 6.061e-16
Complete
sp_v3.0_unigene42534 SustainPine v3.0 400
AutoFact: pullulanase [Spinacia oleracea] 0.0
FL-Next: sp=Pullulanase 1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Starch debranching enzyme 2.999e-19
Internal
sp_v3.0_unigene47439 SustainPine v3.0 265
AutoFact: [G] COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases 4.0e-16
FL-Next: sp=Pullulanase 1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene49687 SustainPine v3.0 949
AutoFact: calcineurin-like metallo-phosphoesterase-like protein [Arabidopsis thaliana] gb|AAF04426.1|AC010927_19 unknown protein [Arabidopsis thaliana] gb|AAN12986.1| unknown protein [Arabidopsis thaliana] gb|AEE74842.1| calcineurin-like metallo-phosphoesterase-lik 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ACI14 1.818e-09
Putative N-terminus
sp_v3.0_unigene49925 SustainPine v3.0 386
AutoFact: Pullulanase 1, chloroplastic n=2 Tax=Arabidopsis RepID=PULA1_ARATH 9.0e-34
FL-Next: sp=Pullulanase 1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene54748 SustainPine v3.0 456
AutoFact: Isoamylase-type starch debranching enzyme ISO3 n=1 Tax=Zea mays RepID=Q84UE5_MAIZE 0.0
FL-Next: sp=Isoamylase 3, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Isoamylase isoform 3 1.813e-08
Internal
sp_v3.0_unigene55743 SustainPine v3.0 153
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Methyltransferase-associated protein 6.299e-10
C-terminus
sp_v3.0_unigene58492 SustainPine v3.0 148
AutoFact: isoamylase isoform 1 [Nicotiana langsdorffii x Nicotiana sanderae] 3.0e-08
FL-Next: sp=Isoamylase 1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain