Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Glycoside hydrolase, family 13, N-terminal

Term: IPR004193  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene118443 SustainPine v3.0 413
AutoFact: isoamylase isoform 1 [Pisum sativum] 1.0e-11
FL-Next: sp=Isoamylase 1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Isoamylase 4.029e-12
Internal
sp_v3.0_unigene132360 SustainPine v3.0 392
AutoFact: starch-branching enzyme-like protein [Arabidopsis thaliana] 0.0
FL-Next: Isoform 3 of 1,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic OS=Arabidopsis thaliana GN=SBE3 0.0
Sma3: Starch branching enzyme I 8.87e-29
Internal
sp_v3.0_unigene141050 SustainPine v3.0 524
AutoFact: Starch branching enzyme I n=2 Tax=Populus trichocarpa RepID=A2TIS0_POPTR 1.0e-32
FL-Next: Isoform 2 of 1,4-alpha-glucan-branching enzyme, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=SBE1 0.0
Sma3: Starch branching enzyme I 1.697e-22
Putative C-terminus
sp_v3.0_unigene149686 SustainPine v3.0 351
AutoFact: Isoamylase isoform 1 (Fragment) n=1 Tax=Nicotiana langsdorffii x Nicotiana sanderae RepID=Q1L5W4_NICLS 5.0e-09
FL-Next: sp=Isoamylase 1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene156488 SustainPine v3.0 363
AutoFact: Elongation factor EF-3 n=2 Tax=Chlamydomonadales RepID=A8ISZ1_CHLRE 5.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene156773 SustainPine v3.0 477
AutoFact: glycogen branching enzyme [Botryotinia fuckeliana B05.10] gb|EDN33341.1| glycogen branching enzyme [Botryotinia fuckeliana B05.10] 2.0e-40
FL-Next: sp=1,4-alpha-glucan-branching enzyme 2-1, chloroplastic/amyloplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus
sp_v3.0_unigene164106 SustainPine v3.0 114
AutoFact: Isoamylase isoform 3 n=1 Tax=Solanum tuberosum RepID=Q84YG5_SOLTU 6.0e-12
FL-Next: sp=Isoamylase 3, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Isoamylase isoform 3 8.233e-09
Internal
sp_v3.0_unigene187258 SustainPine v3.0 397
AutoFact: starch branching enzyme II [Solanum tuberosum] 3.0e-36
FL-Next: sp=1,4-alpha-glucan-branching enzyme 2-2, chloroplastic/amyloplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Starch branching enzyme II 8.267e-16
Internal
sp_v3.0_unigene191178 SustainPine v3.0 434
AutoFact: PREDICTED: glucan (1,4-alpha-), branching enzyme 1-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CBA1CF 1.00053e-42
FL-Next: Isoform 2 of 1,4-alpha-glucan-branching enzyme, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=SBE1 0.0
Sma3: Starch branching enzyme I 3.535e-18
Internal
sp_v3.0_unigene195694 SustainPine v3.0 237
AutoFact: 5'-AMP-activated protein kinase-like protein n=3 Tax=Arabidopsis RepID=Q9LFY0_ARATH 3.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain