Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Flagellar basal body rod protein, conserved site

Term: IPR019776  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene1913 SustainPine v3.0 2472
AutoFact: Phytochrome n=12 Tax=Pinaceae RepID=PHY_PICAB 0.0
FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Phytochrome A 6.172e-19
C-terminus
sp_v3.0_unigene6968 SustainPine v3.0 2209
AutoFact: SCARECROW n=1 Tax=Pinus sylvestris RepID=Q0MRQ2_PINSY 0.0
FL-Next: tr=SCARECROW; Pinus sylvestris (Scots pine). 0.0
Sma3: GRAS family transcription factor 1.265e-18
C-terminus
sp_v3.0_unigene8642 SustainPine v3.0 1249
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene12862 SustainPine v3.0 907
AutoFact: SCARECROW n=1 Tax=Pinus sylvestris RepID=Q0MRQ2_PINSY 0.0
FL-Next: tr=SCARECROW; Pinus sylvestris (Scots pine). 0.0
Sma3: GRAS family transcription factor 1.401e-23
C-terminus
sp_v3.0_unigene16695 SustainPine v3.0 362
AutoFact: SCARECROW n=1 Tax=Pinus sylvestris RepID=Q0MRQ2_PINSY 5.0e-38
FL-Next: tr=SCARECROW; Pinus sylvestris (Scots pine). 0.0
Sma3: Protein SCARECROW 5.351e-17
C-terminus
sp_v3.0_unigene44631 SustainPine v3.0 277
AutoFact: Phytochrome (Fragment) n=1 Tax=Pseudotsuga menziesii RepID=Q40917_PSEMZ 1.0e-34
FL-Next: sp=Phytochrome; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Phytochrome A 1.716e-20
Internal
sp_v3.0_unigene57052 SustainPine v3.0 279
AutoFact: Phytochrome P (Fragment) n=3 Tax=Strobus RepID=B8XQ15_PINPE 1.0e-23
FL-Next: sp=Phytochrome; Pinus sylvestris (Scots pine). 0.0
Sma3: Phytochrome D 6.791e-35
Internal
sp_v3.0_unigene61348 SustainPine v3.0 212
AutoFact: SCARECROW n=1 Tax=Pinus sylvestris RepID=Q0MRQ2_PINSY 4.0e-16
FL-Next: tr=SCARECROW; Pinus sylvestris (Scots pine). 0.0
Sma3: Protein SCARECROW 5.753e-18
Internal
sp_v3.0_unigene63420 SustainPine v3.0 129
AutoFact: SCARECROW n=1 Tax=Pinus sylvestris RepID=Q0MRQ2_PINSY 2.0e-09
FL-Next: tr=SCARECROW; Pinus sylvestris (Scots pine). 0.0
Sma3: Protein SCARECROW 1.112e-17
Internal
sp_v3.0_unigene67980 SustainPine v3.0 303
AutoFact: SCARECROW n=1 Tax=Pinus sylvestris RepID=Q0MRQ2_PINSY 6.0e-33
FL-Next: tr=SCARECROW; Pinus sylvestris (Scots pine). 0.0
Sma3: Protein SCARECROW 8.239e-17
Internal
sp_v3.0_unigene99474 SustainPine v3.0 949
AutoFact: Phytochrome n=12 Tax=Pinaceae RepID=PHY_PICAB 0.0
FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Phytochrome A 1.189e-17
Putative C-terminus
sp_v3.0_unigene101625 SustainPine v3.0 1152
AutoFact: GRAS family transcription factor n=2 Tax=Populus trichocarpa RepID=B9GKM9_POPTR 0.0
FL-Next: tr=SCARECROW; Pinus sylvestris (Scots pine). 0.0
Sma3: GRAS family transcription factor 1.602e-13
Internal
sp_v3.0_unigene107322 SustainPine v3.0 365
AutoFact: Phytochrome N (Fragment) n=12 Tax=Pinaceae RepID=Q9FSD5_PINSY 0.0
FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Phytochrome A 1.626e-19
Internal
sp_v3.0_unigene107587 SustainPine v3.0 171
AutoFact: Phytochrome n=12 Tax=Pinaceae RepID=PHY_PICAB 9.0e-20
FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Phytochrome C 7.375e-29
Internal
sp_v3.0_unigene109951 SustainPine v3.0 260
AutoFact: Phytochrome P (Fragment) n=7 Tax=Coniferales RepID=F2Q6H5_9CONI 2.0e-23
FL-Next: sp=Phytochrome; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Phytochrome 9.82e-21
Internal
sp_v3.0_unigene123517 SustainPine v3.0 203
AutoFact: SCARECROW n=1 Tax=Pinus sylvestris RepID=Q0MRQ2_PINSY 6.0e-27
FL-Next: tr=SCARECROW; Pinus sylvestris (Scots pine). 0.0
Sma3: GRAS family transcription factor 1.494e-24
Internal
sp_v3.0_unigene124056 SustainPine v3.0 386
AutoFact: Phytochrome (Fragment) n=1 Tax=Pseudotsuga menziesii RepID=Q40917_PSEMZ 0.0
FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Phytochrome C 3.739e-24
Internal
sp_v3.0_unigene148196 SustainPine v3.0 252
AutoFact: SCARECROW n=1 Tax=Pinus sylvestris RepID=Q0MRQ2_PINSY 8.0e-35
FL-Next: tr=SCARECROW; Pinus sylvestris (Scots pine). 0.0
Sma3: Protein SCARECROW 8.239e-17
Internal
sp_v3.0_unigene149014 SustainPine v3.0 264
AutoFact: Scarecrow 2 n=1 Tax=Lupinus albus RepID=C9WBB7_LUPAL 2.0e-22
FL-Next: tr=SCARECROW; Pinus sylvestris (Scots pine). 0.0
Sma3: Protein SCARECROW 3.051e-17
C-terminus
sp_v3.0_unigene165050 SustainPine v3.0 214
AutoFact: Phytochrome N (Fragment) n=12 Tax=Pinaceae RepID=Q9FSD5_PINSY 1.0e-21
FL-Next: sp=Phytochrome; Pinus sylvestris (Scots pine). 0.0
Sma3: Phytochrome A 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain