Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: SKI-interacting protein SKIP, SNW domain

Term: IPR004015  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene1878 SustainPine v3.0 1134
AutoFact: Nuclear protein skip, putative n=1 Tax=Ricinus communis RepID=B9SX87_RICCO 0.0
FL-Next: tr=Nuclear protein skip, putative; Ricinus communis (Castor bean). 0.0
Sma3: Pre-mRNA-splicing factor prp45 2.076e-09
Putative Complete
sp_v3.0_unigene6749 SustainPine v3.0 2199
AutoFact: pfam02731, SKIP_SNW, SKIP/SNW domain 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Sma3: GAMYB-binding protein 9.494e-08
N-terminus
sp_v3.0_unigene9916 SustainPine v3.0 2463
AutoFact: pfam02731, SKIP_SNW, SKIP/SNW domain 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Pre-mRNA-splicing factor prp45 3.622e-09
Complete
sp_v3.0_unigene11867 SustainPine v3.0 2486
AutoFact: pfam02731, SKIP_SNW, SKIP/SNW domain 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Pre-mRNA-splicing factor prp45 3.335e-09
C-terminus
sp_v3.0_unigene29802 SustainPine v3.0 1231
AutoFact: Nuclear protein skip, putative n=1 Tax=Ricinus communis RepID=B9SX87_RICCO 0.0
FL-Next: tr=Nuclear protein skip, putative; Ricinus communis (Castor bean). 0.0
Sma3: Pre-mRNA-splicing factor prp45 1.902e-09
C-terminus
sp_v3.0_unigene44113 SustainPine v3.0 2808
AutoFact: pfam02731, SKIP_SNW, SKIP/SNW domain 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Pre-mRNA-splicing factor prp45 3.622e-09
Complete
sp_v3.0_unigene57725 SustainPine v3.0 140
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Chlorella variabilis (Green alga). 0.0
Internal
sp_v3.0_unigene69790 SustainPine v3.0 122
AutoFact: pfam02731, SKIP_SNW, SKIP/SNW domain 2.0e-10
FL-Next: tr=Nuclear protein skip, putative; Ricinus communis (Castor bean). 0.0
Sma3: GAMYB-binding protein 3.212e-08
Internal
sp_v3.0_unigene74313 SustainPine v3.0 379
AutoFact: GAMYB-binding protein (Fragment) n=1 Tax=Hordeum vulgare subsp. vulgare RepID=Q84UD2_HORVD 2.00386e-43
FL-Next: tr=Putative uncharacterized protein Sb04g033860; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Sma3: GAMYB-binding protein 8.118e-08
Internal
sp_v3.0_unigene127036 SustainPine v3.0 1647
AutoFact: Nuclear protein skip, putative n=1 Tax=Ricinus communis RepID=B9SX87_RICCO 0.0
FL-Next: tr=Nuclear protein skip, putative; Ricinus communis (Castor bean). 0.0
Sma3: Pre-mRNA-splicing factor prp45 2.953e-09
Putative Complete
sp_v3.0_unigene127116 SustainPine v3.0 894
AutoFact: Nuclear protein skip, putative n=1 Tax=Ricinus communis RepID=B9SX87_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Pre-mRNA-splicing factor prp45 1.616e-09
C-terminus
sp_v3.0_unigene130292 SustainPine v3.0 601
AutoFact: Nuclear protein skip, putative n=1 Tax=Ricinus communis RepID=B9SX87_RICCO 1.0e-37
FL-Next: tr=Nuclear protein skip, putative; Ricinus communis (Castor bean). 0.0
Sma3: Pre-mRNA-splicing factor prp45 1.39e-09
C-terminus
sp_v3.0_unigene155443 SustainPine v3.0 614
AutoFact: SNW domain-containing protein 1 n=37 Tax=Tetrapoda RepID=SNW1_HUMAN 7.00649e-43
FL-Next: tr=Putative uncharacterized protein; Volvox carteri (Green alga). 0.0
Putative N-terminus
sp_v3.0_unigene156614 SustainPine v3.0 193
AutoFact: Nuclear protein skip, putative n=1 Tax=Ricinus communis RepID=B9SX87_RICCO 2.0e-06
FL-Next: tr=Putative uncharacterized protein; Chlorella variabilis (Green alga). 0.0
Internal
sp_v3.0_unigene176617 SustainPine v3.0 280
AutoFact: SKIP_SNW multi-domain protein 2.0e-11
coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain