Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Splicing factor PWI

Term: IPR002483  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene1549 SustainPine v3.0 3006
AutoFact: MAP7 multi-domain protein 1.0e-09
FL-Next: tr=Os03g0270200 protein; Oryza sativa subsp. japonica (Rice). 0.0
Putative Complete
sp_v3.0_unigene2771 SustainPine v3.0 1856
AutoFact: putative RNA-binding region RNP-1 and Splicing factor PWI family member protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene5641 SustainPine v3.0 1815
AutoFact: putative RNA-binding region RNP-1 and Splicing factor PWI family member protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene8408 SustainPine v3.0 2085
AutoFact: putative transformer serine/arginine-rich ribonucleoprotein [Oryza sativa Japonica Group] gb|EAZ26366.1| hypothetical protein OsJ_10248 [Oryza sativa Japonica Group] 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative transformer-SR ribonucleoprotein 4.796e-12
Putative Complete
sp_v3.0_unigene9980 SustainPine v3.0 1104
AutoFact: putative transformer serine/arginine-rich ribonucleoprotein [Oryza sativa Japonica Group] gb|EAZ26366.1| hypothetical protein OsJ_10248 [Oryza sativa Japonica Group] 7.00005e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative transformer-SR ribonucleoprotein 3.175e-12
Putative Complete
sp_v3.0_unigene10955 SustainPine v3.0 1793
AutoFact: RNA binding motif protein n=1 Tax=Cucumis melo subsp. melo RepID=E5GBJ9_CUCME 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene18726 SustainPine v3.0 1007
AutoFact: Tymo_45kd_70kd multi-domain protein 1.0e-10
Sma3: Putative arginine/serine-rich protein 3.506e-09
coding
sp_v3.0_unigene29918 SustainPine v3.0 2050
AutoFact: pre-mRNA splicing factor domain-containing protein [Arabidopsis thaliana] gb|AAC16071.1| expressed protein [Arabidopsis thaliana] gb|AAK74011.1| At2g44200/F6E13.34 [Arabidopsis thaliana] gb|AAM14905.1| expressed protein [Arabidopsis thaliana] gb|AAM47345. 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene30448 SustainPine v3.0 810
AutoFact: PWI domain containing protein 1.0e-26
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
N-terminus
sp_v3.0_unigene37469 SustainPine v3.0 1896
AutoFact: PWI multi-domain protein 4.0e-26
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: Putative arginine/serine-rich protein 6.271e-09
Complete
sp_v3.0_unigene41149 SustainPine v3.0 264
AutoFact: DUF1777 multi-domain protein 2.0e-09
coding
sp_v3.0_unigene86353 SustainPine v3.0 531
AutoFact: Gag_spuma multi-domain protein 9.0e-15
coding
sp_v3.0_unigene86795 SustainPine v3.0 400
AutoFact: DUF1777 multi-domain protein 8.0e-10
coding
sp_v3.0_unigene93599 SustainPine v3.0 1005
AutoFact: pre-mRNA splicing factor domain-containing protein [Arabidopsis thaliana] gb|AAC16071.1| expressed protein [Arabidopsis thaliana] gb|AAK74011.1| At2g44200/F6E13.34 [Arabidopsis thaliana] gb|AAM14905.1| expressed protein [Arabidopsis thaliana] gb|AAM47345. 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SRM102 7.797e-06
C-terminus
sp_v3.0_unigene131711 SustainPine v3.0 340
AutoFact: RNA binding motif protein n=1 Tax=Cucumis melo subsp. melo RepID=E5GBJ9_CUCME 5.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene143356 SustainPine v3.0 1621
AutoFact: Peptidyl-prolyl cis-trans isomerase, putative n=1 Tax=Ricinus communis RepID=B9RP81_RICCO 3.0e-10
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Multidomain cyclophilin type peptidyl-prolyl cis-trans isomerase 9.698e-09
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain