Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: RNA-binding protein Lupus La

Term: IPR006630  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene1439 SustainPine v3.0 4417
• AutoFact: Lupus la ribonucleoprotein, putative n=1 Tax=Ricinus communis RepID=B9S0U6_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene2832 SustainPine v3.0 2566
• AutoFact: RNA-binding protein [Arabidopsis thaliana] gb|AAK52994.1|AF375410_1 At2g43970/F6E13.10 [Arabidopsis thaliana] gb|AAK56266.1|AF367277_1 At2g43970/F6E13.10 [Arabidopsis thaliana] gb|AAK06847.1| VirF-interacting protein FIP1 [Arabidopsis thaliana] gb|AAL0708 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Lupus la ribonucleoprotein, putative 2.064e-10
Complete
sp_v3.0_unigene5005 SustainPine v3.0 950
• AutoFact: peroxidase 7 [Arabidopsis thaliana] sp|Q9SY33.1|PER7_ARATH RecName: Full=Peroxidase 7; Short=Atperox P7; AltName: Full=ATP30; Flags: Precursor gb|AAD32944.1|AC004135_19 T17H7.19 [Arabidopsis thaliana] gb|AAF98194.1|AC000107_17 F17F8.26 [Arabidopsis thalia 0.0
• FL-Next: tr=Peroxidase; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Peroxidase 0.0
Putative C-terminus
sp_v3.0_unigene7208 SustainPine v3.0 2587
• AutoFact: winged-helix DNA-binding transcription factor family protein [Arabidopsis thaliana] gb|AAM10313.1| AT5g66100/K2A18_18 [Arabidopsis thaliana] gb|AAN31109.1| At5g66100/K2A18_18 [Arabidopsis thaliana] gb|AED98159.1| winged-helix DNA-binding transcription fac 8.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene7744 SustainPine v3.0 1232
• AutoFact: Peroxidase 10, putative n=1 Tax=Ricinus communis RepID=B9S775_RICCO 0.0
• FL-Next: tr=Peroxidase; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Peroxidase 2.007e-31
Putative Complete
sp_v3.0_unigene15979 SustainPine v3.0 798
• AutoFact: Small RNA 2'-O-methyltransferase n=3 Tax=Camelineae RepID=HEN1_ARATH 2.0e-23
• FL-Next: sp=Small RNA 2'-O-methyltransferase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Putative uncharacterized protein T13K14.70 8.285e-06
N-terminus
sp_v3.0_unigene16069 SustainPine v3.0 1366
• AutoFact: Lupus la ribonucleoprotein, putative n=1 Tax=Ricinus communis RepID=B9S0U6_RICCO 5.0e-18
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
C-terminus
sp_v3.0_unigene17782 SustainPine v3.0 2121
• AutoFact: Lupus la ribonucleoprotein, putative n=1 Tax=Ricinus communis RepID=B9SSZ3_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Lupus la ribonucleoprotein, putative 1.484e-10
Complete
sp_v3.0_unigene18133 SustainPine v3.0 2070
• AutoFact: La protein 1 [Arabidopsis thaliana] gb|AAL07086.1| unknown protein [Arabidopsis thaliana] gb|AEE86109.1| La protein 1 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene22614 SustainPine v3.0 881
• AutoFact: GRP multi-domain protein 2.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene23165 SustainPine v3.0 1346
• AutoFact: Peroxidase 10, putative n=1 Tax=Ricinus communis RepID=B9S775_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peroxidase 0.0
Complete
sp_v3.0_unigene23499 SustainPine v3.0 734
• AutoFact: DUF1431 multi-domain protein 4.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene24305 SustainPine v3.0 2248
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene28974 SustainPine v3.0 396
• AutoFact: Peroxidase 15 n=1 Tax=Ipomoea batatas RepID=PER15_IPOBA 9.99995e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peroxidase 0.0
Internal
sp_v3.0_unigene31885 SustainPine v3.0 1288
• AutoFact: Peroxidase 10, putative n=1 Tax=Ricinus communis RepID=B9S775_RICCO 0.0
• FL-Next: tr=Peroxidase; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Peroxidase 0.0
Complete
sp_v3.0_unigene35910 SustainPine v3.0 598
• AutoFact: LA RNA-binding protein n=5 Tax=Arabidopsis RepID=F4K704_ARATH 3.9937e-43
• FL-Next: tr=AT5g21160/T10F18_190; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus
sp_v3.0_unigene45386 SustainPine v3.0 321
• AutoFact: RNA methylase HUA ENHANCER 1 [Arabidopsis thaliana] ref|NP_001190782.1| RNA methylase HUA ENHANCER 1 [Arabidopsis thaliana] sp|Q9C5Q8.1|HEN1_ARATH RecName: Full=Small RNA 2'-O-methyltransferase; AltName: Full=Protein CORYMBOSA 2; AltName: Full=Protein HUA 8.0e-22
• FL-Next: sp=Small RNA 2'-O-methyltransferase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene51977 SustainPine v3.0 301
• AutoFact: La protein 1 [Arabidopsis thaliana] gb|AAL07086.1| unknown protein [Arabidopsis thaliana] gb|AEE86109.1| La protein 1 [Arabidopsis thaliana] 4.0e-13
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Putative N-terminus
sp_v3.0_unigene65700 SustainPine v3.0 254
• AutoFact: Lupus la ribonucleoprotein, putative n=1 Tax=Ricinus communis RepID=B9RS49_RICCO 9.0e-20
• FL-Next: tr=Lupus la ribonucleoprotein, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene84077 SustainPine v3.0 284
• AutoFact: DUF3729 multi-domain protein 1.0e-08
coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain