Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ribosome-binding factor A

Term: IPR000238  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene53730 SustainPine v3.0 400
• AutoFact: RCC1 domain containing protein 3.0e-09
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene54007 SustainPine v3.0 95
• AutoFact: MATE efflux family protein [Arabidopsis thaliana] gb|AAL87319.1| unknown protein [Arabidopsis thaliana] gb|AAM91784.1| unknown protein [Arabidopsis thaliana] gb|AEE31561.1| MATE efflux family protein [Arabidopsis thaliana] 1.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multidrug resistance pump, putative 3.07e-33
Internal
sp_v3.0_unigene55976 SustainPine v3.0 261
• AutoFact: Pectinesterase n=1 Tax=Eutrema halophilum RepID=E4MXA5_THEHA 1.0e-29
• FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectinesterase 0.0
Internal
sp_v3.0_unigene57953 SustainPine v3.0 138
• AutoFact: Detoxifying efflux carrier 35 n=5 Tax=Arabidopsis RepID=F4JTB2_ARATH 1.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative ripening regulated protein 2.38e-07
Internal
sp_v3.0_unigene58859 SustainPine v3.0 243
• AutoFact: MATE efflux family protein [Arabidopsis thaliana] gb|AAD46034.1|AC007519_19 F16N3.20 [Arabidopsis thaliana] gb|AEE32181.1| MATE efflux family protein [Arabidopsis thaliana] 2.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multidrug resistance pump, putative 8.071e-34
Internal
sp_v3.0_unigene61112 SustainPine v3.0 186
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein Sb01g027810; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Internal
sp_v3.0_unigene62042 SustainPine v3.0 242
• AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] emb|CAC01839.1| WD40-repeat protein [Arabidopsis thaliana] gb|AED92333.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 4.0e-11
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene66699 SustainPine v3.0 331
• AutoFact: Unassigned protein
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
• Sma3: F28L1.23 protein 9.747e-06
Internal
sp_v3.0_unigene68889 SustainPine v3.0 219
• AutoFact: mate efflux domain-containing protein [Arabidopsis thaliana] gb|AAK53040.1|AF375456_1 AT5g65380/MNA5_11 [Arabidopsis thaliana] dbj|BAB11560.1| unnamed protein product [Arabidopsis thaliana] gb|AAN28899.1| At5g65380/MNA5_11 [Arabidopsis thaliana] gb|AED980 1.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multidrug resistance pump, putative 5.434e-39
Internal
sp_v3.0_unigene69578 SustainPine v3.0 354
• AutoFact: histidine amino acid transporter [Oryza sativa Indica Group] 2.0e-23
• FL-Next: sp=Lysine histidine transporter-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Lysine/histidine transporter 7.017e-23
C-terminus
sp_v3.0_unigene70765 SustainPine v3.0 371
• AutoFact: Sucrose transport protein n=1 Tax=Spinacia oleracea RepID=SUT_SPIOL 1.0e-21
• FL-Next: sp=Sucrose transport protein; Spinacia oleracea (Spinach). 0.0
• Sma3: Sucrose transporter 1.287e-37
Putative N-terminus
sp_v3.0_unigene72879 SustainPine v3.0 214
• AutoFact: Lysine histidine transporter-like 3 [Arabidopsis thaliana] sp|O22719.2|LHTL3_ARATH RecName: Full=Lysine histidine transporter-like 3 gb|AEE33815.1| Lysine histidine transporter-like 3 [Arabidopsis thaliana] 4.0e-13
• FL-Next: sp=Lysine histidine transporter-like 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Lysine/histidine transporter 6.089e-23
Internal
sp_v3.0_unigene73121 SustainPine v3.0 194
• AutoFact: Transparent testa 12 protein n=1 Tax=Zea mays RepID=B6SV36_MAIZE 1.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multidrug resistance pump, putative 1.36e-14
Internal
sp_v3.0_unigene74310 SustainPine v3.0 326
• AutoFact: [V] COG0534 Na+-driven multidrug efflux pump 7.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multidrug resistance pump, putative 3.603e-25
Internal
sp_v3.0_unigene74761 SustainPine v3.0 381
• AutoFact: ERD (early-responsive to dehydration stress) family protein [Arabidopsis thaliana] gb|AAD15333.1| hypothetical protein [Arabidopsis thaliana] emb|CAB77775.1| hypothetical protein [Arabidopsis thaliana] gb|AEE82248.1| ERD (early-responsive to dehydration s 9.99995e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene76134 SustainPine v3.0 282
• AutoFact: Pectinesterase (Fragment) n=1 Tax=Musa acuminata AAA Group RepID=C4N552_MUSAC 5.0e-37
• FL-Next: sp=Pectinesterase; Taiwania cryptomerioides. 0.0
• Sma3: Pectinesterase 0.0
Internal
sp_v3.0_unigene76503 SustainPine v3.0 393
• AutoFact: Lysine/histidine transporter n=1 Tax=Populus trichocarpa RepID=B9GJB7_POPTR 4.0e-19
• FL-Next: sp=Lysine histidine transporter-like 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Lysine/histidine transporter 6.68e-20
C-terminus
sp_v3.0_unigene77449 SustainPine v3.0 280
• AutoFact: mate efflux domain-containing protein [Arabidopsis thaliana] gb|AAK53040.1|AF375456_1 AT5g65380/MNA5_11 [Arabidopsis thaliana] dbj|BAB11560.1| unnamed protein product [Arabidopsis thaliana] gb|AAN28899.1| At5g65380/MNA5_11 [Arabidopsis thaliana] gb|AED980 6.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multidrug resistance pump, putative 0.0
Internal
sp_v3.0_unigene80988 SustainPine v3.0 340
• AutoFact: Pectinesterase (Fragment) n=1 Tax=Musa acuminata AAA Group RepID=C4N552_MUSAC 0.0
• FL-Next: sp=Pectinesterase; Taiwania cryptomerioides. 0.0
• Sma3: Pectinesterase 0.0
Internal
sp_v3.0_unigene81701 SustainPine v3.0 306
• AutoFact: Pectinesterase n=1 Tax=Fragaria x ananassa RepID=Q7X9B1_FRAAN 4.0e-37
• FL-Next: sp=Pectinesterase; Taiwania cryptomerioides. 0.0
• Sma3: Pectinesterase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain