Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: RNA polymerase II, heptapeptide repeat, eukaryotic

Term: IPR000684  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene73968 SustainPine v3.0 267
AutoFact: leucine-rich repeat protein kinase-like protein [Arabidopsis thaliana] gb|AED90413.1| leucine-rich repeat protein kinase-like protein [Arabidopsis thaliana] 1.0e-19
FL-Next: tr=Somatic embryogenesis receptor-like kinase 1; Araucaria angustifolia. 0.0
Internal
sp_v3.0_unigene73982 SustainPine v3.0 496
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Marasmius alliaceus RepID=Q5I2D9_9AGAR 0.0
FL-Next: sp=DNA-directed RNA polymerase subunit beta''; Nageia nagi. Plastid; Chloroplast. 0.0
Sma3: DNA-directed RNA polymerase 0.0
Internal
sp_v3.0_unigene75636 SustainPine v3.0 480
AutoFact: rhamnogalacturonate lyase-like protein [Arabidopsis thaliana] gb|AEE28513.1| rhamnogalacturonate lyase-like protein [Arabidopsis thaliana] 2.0e-40
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: Lyase, putative 4.428e-23
Internal
sp_v3.0_unigene77648 SustainPine v3.0 371
AutoFact: Receptor protein kinase-like n=1 Tax=Arabidopsis thaliana RepID=Q9LT97_ARATH 2.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Leucine-rich repeat receptor-like protein kinase 9.549e-14
Internal
sp_v3.0_unigene80316 SustainPine v3.0 327
AutoFact: Leucine-rich repeat transmembrane protein kinase n=1 Tax=Glycine max RepID=C6FF66_SOYBN 2.99878e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Receptor protein kinase-like 4.067e-11
Internal
sp_v3.0_unigene85223 SustainPine v3.0 352
AutoFact: Caudal_act multi-domain protein 5.0e-06
Sma3: DNA-directed RNA polymerase 6.888e-19
coding
sp_v3.0_unigene85291 SustainPine v3.0 323
AutoFact: Herpes_BLLF1 multi-domain protein 6.0e-09
Sma3: DNA-directed RNA polymerase 6.813e-20
coding
sp_v3.0_unigene85910 SustainPine v3.0 233
AutoFact: DUF605 multi-domain protein 2.0e-06
Sma3: DNA-directed RNA polymerase 1.97e-19
coding
sp_v3.0_unigene86121 SustainPine v3.0 334
AutoFact: DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group RepID=Q0DKN9_ORYSJ 0.0001
coding
sp_v3.0_unigene94623 SustainPine v3.0 861
AutoFact: Os01g0689900 protein n=3 Tax=Oryza sativa Japonica Group RepID=Q5N7Q8_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Wall-associated kinase, putative 1.686e-18
Internal
sp_v3.0_unigene96158 SustainPine v3.0 416
AutoFact: DNA-directed RNA polymerase (Fragment) n=2 Tax=Spermatophyta RepID=Q2TUM9_9CONI 0.0
FL-Next: sp=DNA-directed RNA polymerase subunit beta''; Agathis australis (Kauri) (Dammara australis). Plastid; Chloroplast. 0.0
Sma3: DNA-directed RNA polymerase 5.497e-32
Internal
sp_v3.0_unigene98254 SustainPine v3.0 317
AutoFact: Reticuline oxidase, putative n=2 Tax=Ricinus communis RepID=B9SAZ7_RICCO 4.0e-24
FL-Next: sp=Reticuline oxidase; Eschscholzia californica (California poppy). 0.0
Sma3: Reticuline oxidase, putative 4.309e-11
Internal
sp_v3.0_unigene101197 SustainPine v3.0 242
AutoFact: leucine-rich repeat transmembrane protein kinase [Ipomoea nil] 5.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene107232 SustainPine v3.0 212
AutoFact: wall-associated receptor kinase-like 14 [Arabidopsis thaliana] ref|NP_850041.1| wall-associated receptor kinase-like 14 [Arabidopsis thaliana] sp|Q8RY67.2|WAKLO_ARATH RecName: Full=Wall-associated receptor kinase-like 14; Flags: Precursor gb|AAC23760.2| p 7.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative wall-associated kinase 4 3.095e-13
Internal
sp_v3.0_unigene111414 SustainPine v3.0 467
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RWX1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: E3 ubiquitin ligase 1.48e-17
Internal
sp_v3.0_unigene113392 SustainPine v3.0 445
AutoFact: Rhamnogalacturonate lyase family protein [Arabidopsis thaliana] emb|CAB45078.1| LG27/30-like gene [Arabidopsis thaliana] emb|CAB79353.1| LG27/30-like gene [Arabidopsis thaliana] gb|AEE84903.1| Rhamnogalacturonate lyase family protein [Arabidopsis thaliana 1.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Lyase, putative 9.343e-29
C-terminus
sp_v3.0_unigene114847 SustainPine v3.0 380
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Vitis vinifera RepID=D7TI03_VITVI 2.0e-39
FL-Next: sp=DNA-directed RNA polymerase; Pinus taiwanensis. Plastid; Chloroplast. 0.0
Sma3: DNA-directed RNA polymerase 1.032e-34
Internal
sp_v3.0_unigene116414 SustainPine v3.0 389
AutoFact: Leucine-rich repeat transmembrane protein kinase n=1 Tax=Glycine max RepID=C6FF66_SOYBN 9.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene118670 SustainPine v3.0 335
AutoFact: DNA-directed RNA polymerase n=6 Tax=core eudicotyledons RepID=B9SXC0_RICCO 3.0e-24
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA-directed RNA polymerase 4.865e-17
Internal
sp_v3.0_unigene120305 SustainPine v3.0 407
AutoFact: Reticuline oxidase n=1 Tax=Eschscholzia californica RepID=RETO_ESCCA 4.0e-36
FL-Next: sp=Reticuline oxidase; Eschscholzia californica (California poppy). 0.0
Sma3: Reticuline oxidase, putative 1.4013e-45
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain