Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: DNA-directed RNA polymerase, phage-type

Term: IPR002092  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene1283 SustainPine v3.0 3015
AutoFact: DNA-directed RNA polymerase (Fragment) n=2 Tax=Vitis vinifera RepID=D7TA90_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA-directed RNA polymerase 2.436e-26
Complete
sp_v3.0_unigene8267 SustainPine v3.0 929
AutoFact: DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial n=4 Tax=Nicotiana RepID=RPO2B_TOBAC 0.0
FL-Next: sp=DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial; Nicotiana tabacum (Common tobacco). 0.0
Sma3: DNA-directed RNA polymerase 1.692e-24
Internal
sp_v3.0_unigene40923 SustainPine v3.0 307
AutoFact: DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial n=4 Tax=Nicotiana RepID=RPO2B_TOBAC 1.0e-20
FL-Next: sp=DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial; Nicotiana tabacum (Common tobacco). 0.0
Sma3: DNA-directed RNA polymerase 6.652e-11
Internal
sp_v3.0_unigene54260 SustainPine v3.0 413
AutoFact: Polyprotein n=1 Tax=Solanum lycopersicum RepID=Q9ZS84_SOLLC 3.00004e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 2.45e-19
Putative Complete
sp_v3.0_unigene56377 SustainPine v3.0 386
AutoFact: Integrase core domain containing protein n=1 Tax=Asparagus officinalis RepID=Q2AA43_ASPOF 6.0e-38
FL-Next: tr=Integrase core domain containing protein; Asparagus officinalis (Garden asparagus). 0.0
Sma3: Gag-Pol polyprotein 3.525e-11
Internal
sp_v3.0_unigene124869 SustainPine v3.0 194
AutoFact: DNA-directed RNA polymerase 1B, mitochondrial n=3 Tax=Nicotiana RepID=RPO1B_TOBAC 7.0e-21
FL-Next: sp=DNA-directed RNA polymerase 1B, mitochondrial; Nicotiana tabacum (Common tobacco). 0.0
Sma3: DNA-directed RNA polymerase 4.408e-19
Internal
sp_v3.0_unigene131755 SustainPine v3.0 187
AutoFact: DNA-directed RNA polymerase (Fragment) n=2 Tax=Vitis vinifera RepID=D7TA90_VITVI 4.0e-15
FL-Next: sp=DNA-directed RNA polymerase 1B, mitochondrial; Nicotiana tabacum (Common tobacco). 0.0
Sma3: DNA-directed RNA polymerase 6.566e-26
Internal
sp_v3.0_unigene135441 SustainPine v3.0 199
AutoFact: DNA-directed RNA polymerase n=1 Tax=Vitis vinifera RepID=B6VJT2_VITVI 9.0e-13
FL-Next: sp=DNA-directed RNA polymerase; Phoenix dactylifera (Date palm). Mitochondrion. 0.0
Internal
sp_v3.0_unigene157504 SustainPine v3.0 252
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Acanthamoeba castellanii RepID=Q0QFR1_ACACA 2.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA-directed RNA polymerase 1.16e-07
C-terminus
sp_v3.0_unigene166617 SustainPine v3.0 494
AutoFact: Integrase core domain containing protein n=1 Tax=Asparagus officinalis RepID=Q2AA43_ASPOF 3.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Gag-Pol polyprotein 4.92e-11
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain