Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: YrdC-like domain

Term: IPR006070  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene1155 SustainPine v3.0 1366
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_851231.1| RING/U-box domain-containing protein [Arabidopsis thaliana] dbj|BAB08241.1| unnamed protein product [Arabidopsis thaliana] gb|AED97347.1| RING/U-box domain-containing protein [Ar 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein binding protein, putative 1.891e-09
Putative Complete
sp_v3.0_unigene1177 SustainPine v3.0 1439
AutoFact: Ischemia/reperfusion inducible protein n=3 Tax=Andropogoneae RepID=B6T950_MAIZE 0.0
FL-Next: tr=Uncharacterized protein; Zea mays (Maize). 0.0
Complete
sp_v3.0_unigene6660 SustainPine v3.0 2641
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_851231.1| RING/U-box domain-containing protein [Arabidopsis thaliana] dbj|BAB08241.1| unnamed protein product [Arabidopsis thaliana] gb|AED97347.1| RING/U-box domain-containing protein [Ar 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein binding protein, putative 6.958e-10
Complete
sp_v3.0_unigene7705 SustainPine v3.0 1553
AutoFact: putative translation factor [Arabidopsis thaliana] gb|AAF03443.1|AC010797_19 hypothetical protein [Arabidopsis thaliana] gb|AAL84979.1| At3g1920/F28J7.25 [Arabidopsis thaliana] gb|AAN28792.1| At3g1920/F28J7.25 [Arabidopsis thaliana] gb|AEE73735.1| putativ 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Complete
sp_v3.0_unigene25804 SustainPine v3.0 512
AutoFact: SUA5/YciO/YrdC/YwlC family protein n=3 Tax=Pseudomonas RepID=E2XWZ5_PSEFL 0.0
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Internal
sp_v3.0_unigene40889 SustainPine v3.0 903
AutoFact: Zinc finger (C3HC4 type RING finger) family protein n=1 Tax=Musa acuminata RepID=Q1EPH4_MUSAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein binding protein, putative 1.972e-09
C-terminus
sp_v3.0_unigene94440 SustainPine v3.0 1286
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_851231.1| RING/U-box domain-containing protein [Arabidopsis thaliana] dbj|BAB08241.1| unnamed protein product [Arabidopsis thaliana] gb|AED97347.1| RING/U-box domain-containing protein [Ar 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein binding protein, putative 1.27e-09
Complete
sp_v3.0_unigene100729 SustainPine v3.0 279
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene113948 SustainPine v3.0 650
AutoFact: Ischemia/reperfusion inducible protein n=3 Tax=Andropogoneae RepID=B6T950_MAIZE 0.0
FL-Next: tr=Uncharacterized protein; Zea mays (Maize). 0.0
C-terminus
sp_v3.0_unigene207758 SustainPine v3.0 598
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9S9C1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein binding protein, putative 1.972e-09
Putative C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain