Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: YqgF/RNase H-like domain

Term: IPR006641  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene939 SustainPine v3.0 839
AutoFact: Mpp10 multi-domain protein 3.0e-06
coding
sp_v3.0_unigene2292 SustainPine v3.0 846
AutoFact: SDA1 multi-domain protein 1.0e-10
coding
sp_v3.0_unigene3650 SustainPine v3.0 5676
AutoFact: transcription elongation factor SPT6 [Arabidopsis thaliana] gb|AEE34373.1| transcription elongation factor SPT6 [Arabidopsis thaliana] 0.0
FL-Next: sp=DNA-directed RNA polymerase E subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Global transcription factor group 3.735e-10
Putative N-terminus
sp_v3.0_unigene6275 SustainPine v3.0 1825
AutoFact: putative growth-regulating factor 6 [Zea mays] gb|ABQ01219.1| putative growth-regulating factor 6 [Zea mays] 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Growth-regulating factor 6.044e-23
Complete
sp_v3.0_unigene8449 SustainPine v3.0 1878
AutoFact: GRF domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZIZ8_MALDO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Transcription activator 2.435e-07
C-terminus
sp_v3.0_unigene10879 SustainPine v3.0 1073
AutoFact: growth-regulating factor 1 [Arabidopsis thaliana] gb|AAC32431.1| unknown protein [Arabidopsis thaliana] gb|AAM52876.1| transcription activator [Arabidopsis thaliana] dbj|BAH30398.1| hypothetical protein [Arabidopsis thaliana] gb|AEC07363.1| growth-regulat 2.00386e-43
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: Putative growth-regulating factor 1 5.547e-17
Putative N-terminus
sp_v3.0_unigene14120 SustainPine v3.0 718
AutoFact: UPF0081 domain containing protein 7.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene18327 SustainPine v3.0 612
AutoFact: Mpp10 multi-domain protein 1.0e-06
coding
sp_v3.0_unigene20784 SustainPine v3.0 833
AutoFact: transcription elongation factor SPT6 [Arabidopsis thaliana] gb|AEE34374.1| transcription elongation factor SPT6 [Arabidopsis thaliana] 4.0e-28
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Sma3: Global transcription factor group 4.392e-07
Internal
sp_v3.0_unigene24059 SustainPine v3.0 1174
AutoFact: putative holliday junction resolvase [Arabidopsis thaliana] gb|AEE28856.1| putative holliday junction resolvase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene29523 SustainPine v3.0 768
AutoFact: UPF0081 domain containing protein 6.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene62032 SustainPine v3.0 300
AutoFact: T8F5.22 protein n=4 Tax=Arabidopsis thaliana RepID=O80815_ARATH 2.0e-36
FL-Next: tr=Putative uncharacterized protein OJ1579_G03.7; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Global transcription factor group 4.886e-10
N-terminus
sp_v3.0_unigene62074 SustainPine v3.0 266
AutoFact: Transcription elongation factor SPT6 (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RRH2_PHYPA 3.0e-18
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Internal
sp_v3.0_unigene94686 SustainPine v3.0 473
AutoFact: Transcription elongation factor SPT6 (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RRH2_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Sma3: Global transcription factor group 6.816e-07
Internal
sp_v3.0_unigene102016 SustainPine v3.0 529
AutoFact: UPF0081 domain containing protein 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene106460 SustainPine v3.0 711
AutoFact: transcription elongation factor SPT6 [Arabidopsis thaliana] gb|AEE34374.1| transcription elongation factor SPT6 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Sma3: Global transcription factor group 3.912e-10
Internal
sp_v3.0_unigene106651 SustainPine v3.0 353
AutoFact: SH2 motif; Alcohol dehydrogenase, zinc-containing; Resolvase, RNase H-like fold; Nucleic acid-binding, OB-fold, subgroup [Medicago truncatula] 9.99967e-42
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Global transcription factor group 3.001e-10
Internal
sp_v3.0_unigene115908 SustainPine v3.0 224
AutoFact: SH2 motif; Alcohol dehydrogenase, zinc-containing; Resolvase, RNase H-like fold; Nucleic acid-binding, OB-fold, subgroup n=1 Tax=Medicago truncatula RepID=Q2HUT6_MEDTR 3.0e-07
FL-Next: tr=LCR/BET1; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Internal
sp_v3.0_unigene117632 SustainPine v3.0 290
AutoFact: SH2 motif; Alcohol dehydrogenase, zinc-containing; Resolvase, RNase H-like fold; Nucleic acid-binding, OB-fold, subgroup n=1 Tax=Medicago truncatula RepID=Q2HUT6_MEDTR 8.0e-12
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene149330 SustainPine v3.0 303
AutoFact: putative holliday junction resolvase [Arabidopsis thaliana] gb|AEE28856.1| putative holliday junction resolvase [Arabidopsis thaliana] 7.0e-08
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain