Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: DNA-repair protein, UmuC-like

Term: IPR001126  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene706 SustainPine v3.0 1767
AutoFact: DNA polymerase kappa subunit [Arabidopsis thaliana] gb|AAS91582.1| DNA-directed polymerase kappa [Arabidopsis thaliana] gb|AEE32503.1| DNA polymerase kappa subunit [Arabidopsis thaliana] 5.0e-22
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene3792 SustainPine v3.0 2429
AutoFact: DNA polymerase eta subunit [Arabidopsis thaliana] emb|CAC94893.1| putative DNA polymerase eta [Arabidopsis thaliana] gb|AED95155.1| DNA polymerase eta subunit [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Complete
sp_v3.0_unigene4510 SustainPine v3.0 475
AutoFact: Terminal deoxycytidyl transferase rev1, putative n=1 Tax=Ricinus communis RepID=B9RY76_RICCO 2.0e-33
FL-Next: Isoform 3 of DNA repair protein REV1 OS=Arabidopsis thaliana GN=REV1 0.0
Internal
sp_v3.0_unigene8644 SustainPine v3.0 921
AutoFact: Cation-transporting atpase plant, putative n=1 Tax=Ricinus communis RepID=B9SH00_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Autoinhibited calcium ATPase 1.214e-22
Internal
sp_v3.0_unigene9022 SustainPine v3.0 2243
AutoFact: N-acetyltransferase [Arabidopsis thaliana] gb|ABU62813.1| cohesion establishment factor 7 [Arabidopsis thaliana] gb|AEE85905.1| N-acetyltransferase [Arabidopsis thaliana] 0.0
FL-Next: tr=cDNA, clone: J065201C14, full insert sequence; Oryza sativa subsp. japonica (Rice). 0.0
Complete
sp_v3.0_unigene9320 SustainPine v3.0 984
AutoFact: Ca2+-transporting ATPase like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Autoinhibited calcium ATPase 2.586e-40
C-terminus
sp_v3.0_unigene10702 SustainPine v3.0 598
AutoFact: Calcium ATPase n=2 Tax=Nicotiana benthamiana RepID=D5JXY5_NICBE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Autoinhibited calcium ATPase 1.534e-40
Internal
sp_v3.0_unigene12839 SustainPine v3.0 932
AutoFact: Autoinhibited calcium ATPase n=1 Tax=Populus trichocarpa RepID=B9H9I2_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Autoinhibited calcium ATPase 3.045e-38
Internal
sp_v3.0_unigene15974 SustainPine v3.0 2560
AutoFact: Autoinhibited calcium ATPase (Fragment) n=1 Tax=Populus trichocarpa RepID=B9IN45_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Autoinhibited calcium ATPase 1.70958e-43
N-terminus
sp_v3.0_unigene19747 SustainPine v3.0 902
AutoFact: DNA polymerase kappa subunit n=3 Tax=Arabidopsis thaliana RepID=Q6JDV7_ARATH 0.0
FL-Next: Isoform 2 of DNA repair protein REV1 OS=Arabidopsis thaliana GN=REV1 0.0
Sma3: Putative DNA-directed polymerase, having alternative splicing products 2.032e-09
Internal
sp_v3.0_unigene23207 SustainPine v3.0 3890
AutoFact: PREDICTED: similar to ACA1 (autoinhibited Ca2+ -ATPase 1); calmodulin binding isoform 1 n=1 Tax=Vitis vinifera RepID=UPI00015C9686 0.0
FL-Next: sp=Calcium-transporting ATPase 1, plasma membrane-type; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Autoinhibited calcium ATPase 4.23e-40
Complete
sp_v3.0_unigene27869 SustainPine v3.0 933
AutoFact: Ca2+-transporting ATPase [Arabidopsis thaliana] sp|O81108.1|ACA2_ARATH RecName: Full=Calcium-transporting ATPase 2, plasma membrane-type; AltName: Full=Ca(2+)-ATPase isoform 2 gb|AAC26997.1| plasma membrane-type calcium ATPase [Arabidopsis thaliana] emb|C 0.0
FL-Next: sp=Calcium-transporting ATPase 2, plasma membrane-type; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Cation-transporting atpase plant, putative 6.23e-14
N-terminus
sp_v3.0_unigene37550 SustainPine v3.0 518
AutoFact: Autoinhibited calcium ATPase n=1 Tax=Populus trichocarpa RepID=B9IHW7_POPTR 2.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: P-type ATPase 1.668e-13
C-terminus
sp_v3.0_unigene37774 SustainPine v3.0 2133
AutoFact: Plasma membrane Ca2+-ATPase n=2 Tax=Papilionoideae RepID=Q9FVE8_SOYBN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Autoinhibited calcium ATPase 1.168e-39
Putative Complete
sp_v3.0_unigene37874 SustainPine v3.0 1955
AutoFact: Autoinhibited calcium ATPase n=1 Tax=Populus trichocarpa RepID=B9HAW9_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Autoinhibited calcium ATPase 4.77843e-43
Complete
sp_v3.0_unigene40693 SustainPine v3.0 566
AutoFact: DNA polymerase kappa subunit [Arabidopsis thaliana] gb|AAS91582.1| DNA-directed polymerase kappa [Arabidopsis thaliana] gb|AEE32503.1| DNA polymerase kappa subunit [Arabidopsis thaliana] 0.0
FL-Next: Isoform 4 of DNA repair protein REV1 OS=Arabidopsis thaliana GN=REV1 0.0
Sma3: Putative DNA-directed polymerase, having alternative splicing products 1.945e-09
Internal
sp_v3.0_unigene45170 SustainPine v3.0 169
AutoFact: DNA polymerase kappa subunit n=3 Tax=Arabidopsis thaliana RepID=Q6JDV7_ARATH 4.0e-15
FL-Next: tr=F2J10.13 protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative DNA-directed polymerase, having alternative splicing products 9.277e-10
Internal
sp_v3.0_unigene52240 SustainPine v3.0 455
AutoFact: Terminal deoxycytidyl transferase rev1, putative n=1 Tax=Ricinus communis RepID=B9RY76_RICCO 1.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene61713 SustainPine v3.0 225
AutoFact: DNA polymerase kappa subunit [Arabidopsis thaliana] gb|AAS91582.1| DNA-directed polymerase kappa [Arabidopsis thaliana] gb|AEE32503.1| DNA polymerase kappa subunit [Arabidopsis thaliana] 2.0e-19
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: Putative DNA-directed polymerase, having alternative splicing products 9.576e-10
Internal
sp_v3.0_unigene63826 SustainPine v3.0 154
AutoFact: Calcium-transporting ATPase 1, plasma membrane-type n=4 Tax=BEP clade RepID=ACA1_ORYSJ 4.0e-09
FL-Next: sp=Calcium-transporting ATPase 1, plasma membrane-type; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Autoinhibited calcium ATPase 1.767e-13
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain