Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Helicase, superfamily 1/2, ATP-binding domain, DinG/Rad3-type

Term: IPR014013  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene657 SustainPine v3.0 3163
AutoFact: probable ATP-dependent RNA helicase DDX11 [Danio rerio] gb|AAH85645.1| Zgc:92172 [Danio rerio] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene5903 SustainPine v3.0 1893
AutoFact: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Arabidopsis thaliana] ref|NP_194863.4| Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Arabidopsis thaliana] dbj|BAC43211.1| unknown protein [Arabidops 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein At2g19160 3.002e-08
Complete
sp_v3.0_unigene8148 SustainPine v3.0 1134
AutoFact: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Arabidopsis thaliana] emb|CAB87691.1| putative protein [Arabidopsis thaliana] gb|AAM13183.1| putative protein [Arabidopsis thaliana] gb|AAP68292.1| At5g11730 [Arabidopsis thaliana 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene13337 SustainPine v3.0 734
AutoFact: nucleotide excision repair protein XP-D homolog [Arabidopsis thaliana] 0.0
FL-Next: sp=DNA repair helicase UVH6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA repair helicase UVH6 8.71e-09
C-terminus
sp_v3.0_unigene14757 SustainPine v3.0 560
AutoFact: regulator of telomere elongation helicase 1 [Arabidopsis thaliana] gb|AEE36333.1| regulator of telomere elongation helicase 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene27971 SustainPine v3.0 2344
AutoFact: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Arabidopsis thaliana] emb|CAB87691.1| putative protein [Arabidopsis thaliana] gb|AAM13183.1| putative protein [Arabidopsis thaliana] gb|AAP68292.1| At5g11730 [Arabidopsis thaliana 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein At2g19160 4.041e-08
Complete
sp_v3.0_unigene42137 SustainPine v3.0 161
AutoFact: regulator of telomere elongation helicase 1 [Arabidopsis thaliana] gb|AEE36333.1| regulator of telomere elongation helicase 1 [Arabidopsis thaliana] 4.0e-06
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene44665 SustainPine v3.0 469
AutoFact: regulator of telomere elongation helicase 1 [Arabidopsis thaliana] gb|AEE36333.1| regulator of telomere elongation helicase 1 [Arabidopsis thaliana] 6.02558e-44
FL-Next: sp=DNA repair helicase UVH6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene58195 SustainPine v3.0 409
AutoFact: regulator of telomere elongation helicase 1 [Arabidopsis thaliana] gb|AEE36333.1| regulator of telomere elongation helicase 1 [Arabidopsis thaliana] 1.0e-34
FL-Next: tr=Uncharacterized protein; Zea mays (Maize). 0.0
Internal
sp_v3.0_unigene58845 SustainPine v3.0 184
AutoFact: Fanconi anemia group J protein homolog [Gallus gallus] sp|Q3YK19.1|FANCJ_CHICK RecName: Full=Fanconi anemia group J protein homolog; Short=Protein FACJ; AltName: Full=ATP-dependent RNA helicase BRIP1 gb|AAZ66861.1| BRIP1 [Gallus gallus] 3.0e-18
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene60278 SustainPine v3.0 350
AutoFact: putative BRCA1 interacting protein C-terminal helicase 1 [Oryza sativa Japonica Group] 5.0e-20
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene65453 SustainPine v3.0 237
AutoFact: Dihydrolipoyl dehydrogenase n=2 Tax=Picea sitchensis RepID=B8LLJ4_PICSI 4.0e-29
FL-Next: sp=Dihydrolipoyl dehydrogenase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dihydrolipoyl dehydrogenase 0.0
Internal
sp_v3.0_unigene75397 SustainPine v3.0 313
AutoFact: Dihydrolipoyl dehydrogenase n=2 Tax=Paramecium tetraurelia RepID=A0E455_PARTE 4.0e-31
FL-Next: sp=Dihydrolipoyl dehydrogenase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dihydrolipoyl dehydrogenase 0.0
C-terminus
sp_v3.0_unigene77980 SustainPine v3.0 198
AutoFact: Strong similarity to gb|U04968 nucleotide excision repair protein (ERCC2) from Cricetulus grisseus [Arabidopsis thaliana] 9.0e-18
FL-Next: sp=DNA repair helicase UVH6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA repair helicase UVH6 7.91e-09
Internal
sp_v3.0_unigene80407 SustainPine v3.0 452
AutoFact: Dihydrolipoyl dehydrogenase n=1 Tax=Tuber melanosporum Mel28 RepID=D5GGN7_TUBMM 0.0
FL-Next: sp=Dihydrolipoyl dehydrogenase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dihydrolipoyl dehydrogenase 0.0
Internal
sp_v3.0_unigene99720 SustainPine v3.0 487
AutoFact: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Arabidopsis thaliana] gb|ABF59157.1| hypothetical protein At1g51770 [Arabidopsis thaliana] gb|AEE32713.1| Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protei 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene102846 SustainPine v3.0 625
AutoFact: Strong similarity to gb|U04968 nucleotide excision repair protein (ERCC2) from Cricetulus grisseus [Arabidopsis thaliana] 0.0
FL-Next: sp=DNA repair helicase UVH6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA repair helicase UVH6 7.067e-09
N-terminus
sp_v3.0_unigene105780 SustainPine v3.0 521
AutoFact: regulator of telomere elongation helicase 1 [Arabidopsis thaliana] gb|AEE36333.1| regulator of telomere elongation helicase 1 [Arabidopsis thaliana] 3.0e-28
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Putative C-terminus
sp_v3.0_unigene108814 SustainPine v3.0 377
AutoFact: Strong similarity to gb|U04968 nucleotide excision repair protein (ERCC2) from Cricetulus grisseus [Arabidopsis thaliana] 0.0
FL-Next: sp=DNA repair helicase UVH6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA repair helicase UVH6 7.91e-09
Internal
sp_v3.0_unigene111688 SustainPine v3.0 457
AutoFact: PREDICTED: similar to helicase [Strongylocentrotus purpuratus] 4.0e-25
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain