Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Helicase, superfamily 1/2, ATP-binding domain, DinG/Rad3-type

Term: IPR014013  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene113060 SustainPine v3.0 344
AutoFact: Strong similarity to gb|U04968 nucleotide excision repair protein (ERCC2) from Cricetulus grisseus [Arabidopsis thaliana] 0.0
FL-Next: sp=DNA repair helicase UVH6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA repair helicase UVH6 7.91e-09
Internal
sp_v3.0_unigene122607 SustainPine v3.0 241
AutoFact: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Arabidopsis thaliana] gb|AAD32878.1|AC005489_16 F14N23.16 [Arabidopsis thaliana] gb|ABK32109.1| At1g10280 [Arabidopsis thaliana] gb|AEE28561.1| Core-2/I-branching beta-1,6-N-acety 4.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene133074 SustainPine v3.0 341
AutoFact: regulator of telomere elongation helicase 1 [Arabidopsis thaliana] gb|AEE36333.1| regulator of telomere elongation helicase 1 [Arabidopsis thaliana] 2.0e-24
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene150227 SustainPine v3.0 471
AutoFact: Dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase, putative n=1 Tax=Toxoplasma gondii RepID=B9PQP0_TOXGO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative 2-oxoglutarate dehydrogenase E2 subunit 1.362e-08
C-terminus
sp_v3.0_unigene151275 SustainPine v3.0 412
AutoFact: PREDICTED: similar to DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 n=1 Tax=Ciona intestinalis RepID=UPI000180D1DC 8.0e-30
FL-Next: sp=DNA repair helicase UVH6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene154957 SustainPine v3.0 496
AutoFact: dihydrolipoamide S-succinyltransferase (ISS) [Ostreococcus tauri] emb|CAL53698.1| dihydrolipoamide S-succinyltransferase (ISS) [Ostreococcus tauri] 9.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene155160 SustainPine v3.0 442
AutoFact: Dihydrolipoyl dehydrogenase n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RQY3_9RICK 0.0
FL-Next: sp=Dihydrolipoyl dehydrogenase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dihydrolipoyl dehydrogenase 0.0
Putative C-terminus
sp_v3.0_unigene155801 SustainPine v3.0 539
AutoFact: Dihydrolipoyl dehydrogenase n=1 Tax=Polysphondylium pallidum RepID=D3BDF9_POLPA 0.0
FL-Next: sp=Dihydrolipoyl dehydrogenase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dihydrolipoyl dehydrogenase 0.0
Internal
sp_v3.0_unigene164466 SustainPine v3.0 225
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene183130 SustainPine v3.0 411
AutoFact: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Arabidopsis thaliana] gb|ABJ17144.1| At3g21310 [Arabidopsis thaliana] gb|AEE76491.1| Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Arabidopsis thalia 3.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene201454 SustainPine v3.0 390
AutoFact: DEAD_2 domain protein [Neosartorya fischeri NRRL 181] sp|A1D8E4.1|CHL1_NEOFI RecName: Full=ATP-dependent RNA helicase chl1; AltName: Full=Chromosome loss protein 1 gb|EAW21988.1| DEAD_2 domain protein [Neosartorya fischeri NRRL 181] 1.0e-15
FL-Next: tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain