Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Intermediate filament protein, conserved site

Term: IPR018039  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene185907 SustainPine v3.0 478
AutoFact: putative GDSL-motif lipase/hydrolase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Zinc finger protein, putative 2.061e-29
Internal
sp_v3.0_unigene187950 SustainPine v3.0 291
AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SW84_RICCO 1.0e-14
FL-Next: sp=DEAD-box ATP-dependent RNA helicase 45; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DEAD-box ATP-dependent RNA helicase 45 6.271e-09
C-terminus
sp_v3.0_unigene197299 SustainPine v3.0 349
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Zinc finger protein, putative 1.872e-12
N-terminus
sp_v3.0_unigene202522 SustainPine v3.0 547
AutoFact: Putative carotenoid cleavage dioxygenase n=1 Tax=Chrysanthemum x morifolium RepID=A0JBX7_CHRMO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Carotenoid cleavage dioxygenase 4 5.686e-13
Internal
sp_v3.0_unigene202916 SustainPine v3.0 756
AutoFact: Galactinol synthase n=3 Tax=Brassica napus RepID=B6ZBV9_BRANA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Galactinol synthase 0.0
C-terminus
sp_v3.0_unigene204073 SustainPine v3.0 366
AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 3.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.991e-13
C-terminus
sp_v3.0_unigene207782 SustainPine v3.0 555
AutoFact: galactinol synthase [Brassica napus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Galactinol synthase 0.0
Putative C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain